RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 ARP10275 920 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 CYBAP13498 195 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 ITPKAP23677 461 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 SIGLEC14Q08ET2 396 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 FAM47AQ5JRC9 791 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 ANKRD33Q7Z3H0 272 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 PLEKHH3Q7Z736 793 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 MORC1Q86VD1 984 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 NPLOC4Q8TAT6 608 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 TOX2Q96NM4 488 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 CYP4F12Q9HCS2 524 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 ACTL7BQ9Y614 415 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 RLFQ13129 1914 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 UMODL1Q5DID0 1318 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 PGK1P00558 417 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 LMNAP02545 664 aaKnown RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 CCL23P55773 120 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 EIF4A1P60842 406 aaKnown RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 RING1Q06587 406 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 TCP10Q12799 353 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 TAF7Q15545 349 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 MSMPQ1L6U9 139 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 CCDC152Q4G0S7 254 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 CCAR1Q8IX12 1150 aaKnown RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 GPRC5AQ8NFJ5 357 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 TDRD7Q8NHU6 1098 aaKnown RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 CCDC74AQ96AQ1 378 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 HOOK2Q96ED9 719 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 NIF3L1Q9GZT8 377 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 PICK1Q9NRD5 415 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 LMCD1Q9NZU5 365 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 MORF4L1Q9UBU8 362 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 LEMD3Q9Y2U8 911 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 PCDHGC5Q9Y5F6 944 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 GCN1Q92616 2671 aaKnown RBP6.45□□□□□ -1.38
SDCBP-205ENST00000447267 KMT2EQ8IZD2 1858 aa6.45□□□□□ -1.38
SDCBP-205ENST00000447267 PLXNB2O15031 1838 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 FAM95CA0A1B0GW59 222 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 STXBP3O00186 592 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 EIF1AYO14602 144 aaKnown RBP6.44□□□□□ -1.38
SDCBP-205ENST00000447267 DYNC1LI2O43237 492 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-205ENST00000447267 CPNE3O75131 537 aaKnown RBP6.44□□□□□ -1.38
SDCBP-205ENST00000447267 MAPK4P31152 587 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 TTLL4Q14679 1199 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 POU4F3Q15319 338 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 SCYL3Q8IZE3 742 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 VWCEQ96DN2 955 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 ISCA1Q9BUE6 129 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.44□□□□□ -1.38
SDCBP-205ENST00000447267 FAM50BQ9Y247 325 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 CEP250Q9BV73 2442 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 RFX7Q2KHR2 1363 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 TRIOO75962 3097 aa6.44□□□□□ -1.38
SDCBP-205ENST00000447267 LCHNA4D1U4 455 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 FAM170BA6NMN3 283 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 SEPT4O43236 478 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 NDUFB5O43674 189 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 FKBP1AP62942 108 aaKnown RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 NFKBIBQ15653 356 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 SMAD2Q15796 467 aaKnown RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 SOWAHCQ53LP3 525 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 PI16Q6UXB8 463 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 CYP2W1Q8TAV3 490 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 EPS8L3Q8TE67 593 aaKnown RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 RTF1Q92541 710 aaKnown RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 WDR89Q96FK6 387 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 RIPOR3Q96MK2 946 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 PAGR1Q9BTK6 254 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 EHD4Q9H223 541 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 CWC22Q9HCG8 908 aaKnown RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 STARD7Q9NQZ5 370 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 FAM105AQ9NUU6 356 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 RBPJLQ9UBG7 517 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 DBF4Q9UBU7 674 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-205ENST00000447267 PPP1R9AQ9ULJ8 1098 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 R4GN57 208 aa6.43□□□□□ -1.38
SDCBP-205ENST00000447267 TAF4O00268 1085 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 U2SURPO15042 1029 aaKnown RBP6.42□□□□□ -1.38
SDCBP-205ENST00000447267 DIAPH1O60610 1272 aaKnown RBP6.42□□□□□ -1.38
SDCBP-205ENST00000447267 PROS1P07225 676 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 NFICP08651 508 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 LTBRP36941 435 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 KCNJ4P48050 445 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 USP11P51784 963 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 HMGCS2P54868 508 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 DLX2Q07687 328 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-205ENST00000447267 SPP2Q13103 211 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 GRM2Q14416 872 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 COL19A1Q14993 1142 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 PPM1JQ5JR12 505 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 MFSD14BQ5SR56 506 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 WDR78Q5VTH9 848 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 FAM83AQ86UY5 434 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 ZFPM1Q8IX07 1006 aa6.42□□□□□ -1.38
SDCBP-205ENST00000447267 WDR18Q9BV38 432 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms