RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PCMTD1Q96MG8 357 aaPredicted RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 LZTFL1Q9NQ48 299 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 UBIAD1Q9Y5Z9 338 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 OTOFQ9HC10 1997 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 DHX15O43143 795 aaKnown RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 KIF20AO95235 890 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 MYBP10242 640 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 GNG11P61952 73 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 ITGB3BPQ13352 177 aaPredicted RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 NAA30Q147X3 362 aaPredicted RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 FIGNQ5HY92 759 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 C1orf186Q6ZWK4 172 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 NIPA1Q7RTP0 329 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 CEP63Q96MT8 703 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 PURBQ96QR8 312 aaKnown RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 IRX2Q9BZI1 471 aaPredicted RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 MAP3K20Q9NYL2 800 aaKnown RBP19.31■□□□□ 0.68
SMC6-206ENST00000446852 KIAA1217Q5T5P2 1943 aa19.31■□□□□ 0.68
SMC6-206ENST00000446852 PAPPA2Q9BXP8 1791 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 EPHB6O15197 1021 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 TBCAO75347 108 aaKnown RBP19.3■□□□□ 0.68
SMC6-206ENST00000446852 PGM5Q15124 567 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 BANK1Q8NDB2 785 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 LXNQ9BS40 222 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 PPP2R3BQ9Y5P8 575 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 WDR81Q562E7 1941 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 MUTP22033 750 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 NCBP1Q09161 790 aaKnown RBP19.3■□□□□ 0.68
SMC6-206ENST00000446852 MEA1Q16626 185 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 RNF207Q6ZRF8 634 aa19.3■□□□□ 0.68
SMC6-206ENST00000446852 AGO4Q9HCK5 861 aaKnown RBP19.3■□□□□ 0.68
SMC6-206ENST00000446852 A0A1W2PQJ5 194 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 SFI1A8K8P3 1242 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 FDX1P10109 184 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 ZBED6P86452 979 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 PRKG1Q13976 671 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 EDRF1Q3B7T1 1238 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 CCDC40Q4G0X9 1142 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 DLK2Q6UY11 383 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 NSMFQ6X4W1 530 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 CCDC155Q8N6L0 562 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 JADE2Q9NQC1 790 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 RNF146Q9NTX7 359 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 PRPF6O94906 941 aaKnown RBP19.29■□□□□ 0.68
SMC6-206ENST00000446852 MARSP56192 900 aaKnown RBP19.29■□□□□ 0.68
SMC6-206ENST00000446852 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 SAMD3Q8N6K7 520 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 NACC1Q96RE7 527 aa19.29■□□□□ 0.68
SMC6-206ENST00000446852 FAM207AQ9NSI2 230 aaPredicted RBP19.29■□□□□ 0.68
SMC6-206ENST00000446852 REXO2Q9Y3B8 237 aaKnown RBP19.29■□□□□ 0.68
SMC6-206ENST00000446852 DDNO94850 711 aaPredicted RBP19.28■□□□□ 0.68
SMC6-206ENST00000446852 NDUFA10O95299 355 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 ABL1P00519 1130 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 MTMR1Q13613 665 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 KNOP1Q1ED39 458 aaKnown RBP19.28■□□□□ 0.68
SMC6-206ENST00000446852 RMDN3Q96TC7 470 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 PXMP2Q9NR77 195 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 OLFML3Q9NRN5 406 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 PNMA2Q9UL42 364 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 ZNF214Q9UL59 606 aaPredicted RBP19.28■□□□□ 0.68
SMC6-206ENST00000446852 ADAMTS5Q9UNA0 930 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 TRAF3IP3Q9Y228 551 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 EPN1Q9Y6I3 576 aaPredicted RBP19.28■□□□□ 0.68
SMC6-206ENST00000446852 LOC285556D6RIA3 1793 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 LCTP09848 1927 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 C19orf81C9J6K1 198 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 DSG3P32926 999 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 ADAM9Q13443 819 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 BMT2Q1RMZ1 405 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 NOL9Q5SY16 702 aaKnown RBP19.28■□□□□ 0.68
SMC6-206ENST00000446852 TRIM59Q8IWR1 403 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMC6-206ENST00000446852 PDCD2LQ9BRP1 358 aa19.28■□□□□ 0.68
SMC6-206ENST00000446852 FHDC1Q9C0D6 1143 aaPredicted RBP19.28■□□□□ 0.68
SMC6-206ENST00000446852 SLU7O95391 586 aaKnown RBP19.27■□□□□ 0.68
SMC6-206ENST00000446852 GAP43P17677 238 aa19.27■□□□□ 0.68
SMC6-206ENST00000446852 NR2F2P24468 414 aa19.27■□□□□ 0.68
SMC6-206ENST00000446852 KCNA1Q09470 495 aa19.27■□□□□ 0.68
SMC6-206ENST00000446852 TSR1Q2NL82 804 aaKnown RBP19.27■□□□□ 0.68
SMC6-206ENST00000446852 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
SMC6-206ENST00000446852 MIER3Q7Z3K6 550 aa19.27■□□□□ 0.68
SMC6-206ENST00000446852 LRRN4CLQ8ND94 238 aa19.27■□□□□ 0.68
SMC6-206ENST00000446852 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.68
SMC6-206ENST00000446852 DOCK5Q9H7D0 1870 aa19.27■□□□□ 0.68
SMC6-206ENST00000446852 GCNT3O95395 438 aa19.27■□□□□ 0.67
SMC6-206ENST00000446852 GNA14O95837 355 aa19.27■□□□□ 0.67
SMC6-206ENST00000446852 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.67
SMC6-206ENST00000446852 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.67
SMC6-206ENST00000446852 ANKRD7Q92527 254 aa19.27■□□□□ 0.67
SMC6-206ENST00000446852 MMRN2Q9H8L6 949 aa19.27■□□□□ 0.67
SMC6-206ENST00000446852 AFG3L2Q9Y4W6 797 aa19.27■□□□□ 0.67
SMC6-206ENST00000446852 ASTN1O14525 1302 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 USP2O75604 605 aaPredicted RBP19.26■□□□□ 0.67
SMC6-206ENST00000446852 FAM13AO94988 1023 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 CASQ1P31415 396 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 ARHGAP25P42331 645 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 KCNMA1Q12791 1236 aa19.26■□□□□ 0.67
SMC6-206ENST00000446852 TMEM132BQ14DG7 1078 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms