RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 C21orf2O43822 256 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 CA8P35219 290 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 TTMPQ5BVD1 217 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ARL6IP4Q66PJ3 421 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 CARD10Q9BWT7 1032 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 DBR1Q9UK59 544 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 VHLP40337 213 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 RFX8Q6ZV50 586 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 STOX1Q6ZVD7 989 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 MAN1A2O60476 641 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 AFPP02771 609 aaKnown RBP8.48□□□□□ -1.05
SMG1-202ENST00000446231 MCF2P10911 925 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 RBM5P52756 815 aaKnown RBP eCLIP8.48□□□□□ -1.05
SMG1-202ENST00000446231 IFT122Q9HBG6 1241 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 ARHGAP44Q17R89 818 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 OLFML2BQ68BL8 750 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 HDAC7Q8WUI4 952 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 GPR108Q9NPR9 543 aa8.48□□□□□ -1.05
SMG1-202ENST00000446231 CA4P22748 312 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 LACRTQ9GZZ8 138 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 EXOC7Q9UPT5 735 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 PRPF3O43395 683 aaKnown RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 MGEA5O60502 916 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 SHOX2O60902 331 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 KRT80Q6KB66 452 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 RMDN2Q96LZ7 410 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 EFHD1Q9BUP0 239 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 TRIM49BA6NDI0 452 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 CDK17Q00537 523 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 TRIM55Q9BYV6 548 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 PACSIN2Q9UNF0 486 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 DDX42Q86XP3 938 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMG1-202ENST00000446231 SLC17A8Q8NDX2 589 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 ADCY1Q08828 1119 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 IL1RAPL1Q9NZN1 696 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 CEP72Q9P209 647 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 CFAP43Q8NDM7 1665 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 CCDC22O60826 627 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 DKC1O60832 514 aaKnown RBP eCLIP8.47□□□□□ -1.054e-9■■■■■ 30.3
SMG1-202ENST00000446231 PSEN1P49768 467 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 MPHOSPH6Q99547 160 aaKnown RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 DNAJC7Q99615 494 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 FAM53CQ9NYF3 392 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 ABCC12Q96J65 1359 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 FAM47DPA6NHR8 397 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 CAND2O75155 1236 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 TRHP20396 242 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 EEF1B2P24534 225 aaKnown RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 KCNJ2P63252 427 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 PROCA1Q8NCQ7 364 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 TOM1L1O75674 476 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 SEMA3FQ13275 785 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 FAM26FQ5R3K3 315 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 THEMISQ8N1K5 641 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 GSTT1P30711 240 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 EDEM3Q9BZQ6 932 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 PITPNM2Q9BZ72 1349 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 ALDH5A1P51649 535 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 ATG16L1Q676U5 607 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 MAML3Q96JK9 1138 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 ATXN10Q9UBB4 475 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 MRPS9P82933 396 aaKnown RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 ARHGAP4P98171 946 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 MYLK4Q86YV6 388 aaPredicted RBP8.47□□□□□ -1.05
SMG1-202ENST00000446231 ANLNQ9NQW6 1124 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 AMACRQ9UHK6 382 aa8.47□□□□□ -1.05
SMG1-202ENST00000446231 NCKAP5LQ9HCH0 1330 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 GLI1P08151 1106 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 TPH2Q8IWU9 490 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 NRBF2Q96F24 287 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 RASA4BC9J798 803 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 RASA4O43374 803 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 ESRRBO95718 433 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 ZNF148Q9UQR1 794 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 SOS2Q07890 1332 aaPredicted RBP8.46□□□□□ -1.05
SMG1-202ENST00000446231 TTI1O43156 1089 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 NXNQ6DKJ4 435 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 GLG1Q92896 1179 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 ROPN1BQ9BZX4 212 aaPredicted RBP8.46□□□□□ -1.05
SMG1-202ENST00000446231 ROPN1Q9HAT0 212 aaPredicted RBP8.46□□□□□ -1.05
SMG1-202ENST00000446231 TMEM120BA0PK00 339 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 GID8Q9NWU2 228 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 CFAP65Q6ZU64 1925 aaKnown RBP8.46□□□□□ -1.05
SMG1-202ENST00000446231 SUPT3HO75486 399 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 BRAFP15056 766 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 KIAA1755Q5JYT7 1200 aa8.46□□□□□ -1.05
SMG1-202ENST00000446231 DDR1Q08345 913 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 CNGA3Q16281 694 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 TRIML2Q8N7C3 387 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 KAT2BQ92831 832 aa8.46□□□□□ -1.06
SMG1-202ENST00000446231 ALG13Q9NP73 1137 aaKnown RBP8.46□□□□□ -1.06
SMG1-202ENST00000446231 SEPT3Q9UH03 358 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms