RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 SLC12A2P55011 1212 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 COASYQ13057 564 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 ITPK1Q13572 414 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 SEPT6Q14141 434 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 NFRKBQ6P4R8 1299 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 DHTKD1Q96HY7 919 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 RPS6KC1Q96S38 1066 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 ZCCHC17Q9NP64 241 aaKnown RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 PLCB1Q9NQ66 1216 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 I3L4J1 428 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 OATP04181 439 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 P4HA1P13674 534 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 OSBPP22059 807 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 DHX9Q08211 1270 aaKnown RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 DARS2Q6PI48 645 aaKnown RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 CCDC125Q86Z20 511 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 ENOX1Q8TC92 643 aaKnown RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 ALKBH8Q96BT7 664 aaKnown RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 PCSK1NQ9UHG2 260 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 RPAP1Q9BWH6 1393 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 MFAP3LO75121 409 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 FOSP01100 380 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.021e-6■■■□□ 15.5
RIF1-205ENST00000444746 IFT88Q13099 833 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 GALNT17Q6IS24 598 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 OR6B3Q8NGW1 331 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 NSMCE1Q8WV22 266 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 RIC8AQ9NPQ8 531 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 RAPH1Q70E73 1250 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 RAD54LQ92698 747 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 RNF25Q96BH1 459 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 NACC1Q96RE7 527 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 BEGAINQ9BUH8 593 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 EPB41L4AQ9HCS5 686 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 CDK12Q9NYV4 1490 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 ACSL3O95573 720 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 BBS9Q3SYG4 887 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 KRT26Q7Z3Y9 468 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 PARVGQ9HBI0 331 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 GINM1Q9NU53 330 aa8.67□□□□□ -1.02
RIF1-205ENST00000444746 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.67□□□□□ -1.02
RIF1-205ENST00000444746 ZNF609O15014 1411 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 A6NJR5 290 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 MTMR1Q13613 665 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 KDELC2Q7Z4H8 507 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 STK24Q9Y6E0 443 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 CLTCL1P53675 1640 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 TMEM62Q0P6H9 643 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 FLAD1Q8NFF5 587 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 RMDN3Q96TC7 470 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ABCC3O15438 1527 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 PTPREP23469 700 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 BRD3Q15059 726 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 DNAAF5Q86Y56 855 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 KCTD6Q8NC69 237 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 PPFIBP2Q8ND30 876 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 BRIP1Q9BX63 1249 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 SNX25Q9H3E2 840 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ELP3Q9H9T3 547 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 RNF181Q9P0P0 153 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 GABBR1Q9UBS5 961 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 KAT6BQ8WYB5 2073 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 F5H6K3 240 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 PI4K2BG5E9Z4 385 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 IKBKBO14920 756 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 MXI1P50539 228 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
RIF1-205ENST00000444746 KLRC3Q07444 240 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ANKRD20A3Q5VUR7 823 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 MIS12Q9H081 205 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ANAPC5Q9UJX4 755 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 MROH7-TTC4A0A0A0MT08 1334 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ZBTB5O15062 677 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 RNF8O76064 485 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 CDC25BP30305 580 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ECE1P42892 770 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ANTXR2P58335 489 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 R3HDM1Q15032 1099 aaKnown RBP8.66□□□□□ -1.02
RIF1-205ENST00000444746 PPP6R3Q5H9R7 873 aaPredicted RBP8.66□□□□□ -1.02
RIF1-205ENST00000444746 CCDC62Q6P9F0 684 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 RHPN2Q8IUC4 686 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 SPATA17Q96L03 361 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 TCP1P17987 556 aaKnown RBP8.66□□□□□ -1.02
RIF1-205ENST00000444746 PPFIA1Q13136 1202 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 GGT7Q9UJ14 662 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
RIF1-205ENST00000444746 ATP10DQ9P241 1426 aa8.65□□□□□ -1.02
RIF1-205ENST00000444746 CCDC78A2IDD5 438 aa8.65□□□□□ -1.02
RIF1-205ENST00000444746 LIFRP42702 1097 aa8.65□□□□□ -1.02
RIF1-205ENST00000444746 MTMR3Q13615 1198 aa8.65□□□□□ -1.02
RIF1-205ENST00000444746 KCTD19Q17RG1 926 aaPredicted RBP8.65□□□□□ -1.02
RIF1-205ENST00000444746 CDR2LQ86X02 465 aaPredicted RBP8.65□□□□□ -1.02
RIF1-205ENST00000444746 ATP6V0A1Q93050 837 aa8.65□□□□□ -1.02
RIF1-205ENST00000444746 THAP9Q9H5L6 903 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms