RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 ARHGEF16Q5VV41 709 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 SNRNP48Q6IEG0 339 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 STXBP4Q6ZWJ1 553 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 SFR1Q86XK3 245 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 ZC3H3Q8IXZ2 948 aaKnown RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 ZNF397Q8NF99 534 aaPredicted RBP17.35■□□□□ 0.37
SNX13-204ENST00000444712 TAAR1Q96RJ0 339 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 PDCD2LQ9BRP1 358 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 TEX13BQ9BXU2 312 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 TBC1D7Q9P0N9 293 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 CSADQ9Y600 493 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 UBE4BO95155 1302 aa17.35■□□□□ 0.37
SNX13-204ENST00000444712 EIF3DO15371 548 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNX13-204ENST00000444712 CALUO43852 315 aaPredicted RBP17.34■□□□□ 0.37
SNX13-204ENST00000444712 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
SNX13-204ENST00000444712 DDNO94850 711 aaPredicted RBP17.34■□□□□ 0.37
SNX13-204ENST00000444712 FAM13AO94988 1023 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 P4HBP07237 508 aaKnown RBP17.34■□□□□ 0.37
SNX13-204ENST00000444712 CCND2P30279 289 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 CACNB1Q02641 598 aaPredicted RBP17.34■□□□□ 0.37
SNX13-204ENST00000444712 RAD51AP2Q09MP3 1159 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 SYCP1Q15431 976 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 CCDC40Q4G0X9 1142 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 NSMFQ6X4W1 530 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 SLC30A10Q6XR72 485 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 PCMTD1Q96MG8 357 aaPredicted RBP17.34■□□□□ 0.37
SNX13-204ENST00000444712 DNAJC7Q99615 494 aa17.34■□□□□ 0.37
SNX13-204ENST00000444712 TTC26A0AVF1 554 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 MAFGO15525 162 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 EIF2AK2P19525 551 aaKnown RBP17.33■□□□□ 0.37
SNX13-204ENST00000444712 MRPS9P82933 396 aaKnown RBP17.33■□□□□ 0.37
SNX13-204ENST00000444712 EPM2AIP1Q7L775 607 aaPredicted RBP17.33■□□□□ 0.37
SNX13-204ENST00000444712 GLIS3Q8NEA6 775 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 IL31RAQ8NI17 732 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 LXNQ9BS40 222 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 RUSC1Q9BVN2 902 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 ZSWIM4Q9H7M6 989 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 ZNHIT6Q9NWK9 470 aaKnown RBP17.33■□□□□ 0.37
SNX13-204ENST00000444712 ZNF214Q9UL59 606 aaPredicted RBP17.33■□□□□ 0.37
SNX13-204ENST00000444712 FAM184BQ9ULE4 1060 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 TRAF3IP3Q9Y228 551 aa17.33■□□□□ 0.37
SNX13-204ENST00000444712 A0A0G2JMZ2 1700 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 SOWAHDA6NJG2 315 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 PDXKO00764 312 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 CETN3O15182 167 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 SFNP31947 248 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 JAK3P52333 1124 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 ZBED6P86452 979 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 KNOP1Q1ED39 458 aaKnown RBP17.33■□□□□ 0.36
SNX13-204ENST00000444712 TOGARAM2Q6ZUX3 1019 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 C1orf186Q6ZWK4 172 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 NLRX1Q86UT6 975 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 NELFCDQ8IXH7 590 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 TTYH3Q9C0H2 523 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
SNX13-204ENST00000444712 MRPL44Q9H9J2 332 aaKnown RBP17.33■□□□□ 0.36
SNX13-204ENST00000444712 ARHGEF35A5YM69 484 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 STAM2O75886 525 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 IREB2P48200 963 aaKnown RBP17.32■□□□□ 0.36
SNX13-204ENST00000444712 PPP2R3AQ06190 1150 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 RDM1Q8NG50 284 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 GPRASP2Q96D09 838 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 PARVGQ9HBI0 331 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 TYW1Q9NV66 732 aaKnown RBP17.32■□□□□ 0.36
SNX13-204ENST00000444712 DBR1Q9UK59 544 aaKnown RBP17.32■□□□□ 0.36
SNX13-204ENST00000444712 ADGRG1Q9Y653 693 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 KIAA1217Q5T5P2 1943 aa17.32■□□□□ 0.36
SNX13-204ENST00000444712 DHX15O43143 795 aaKnown RBP17.31■□□□□ 0.36
SNX13-204ENST00000444712 LYPLA2O95372 231 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
SNX13-204ENST00000444712 GUCY2CP25092 1073 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 RPL13P26373 211 aaKnown RBP17.31■□□□□ 0.36
SNX13-204ENST00000444712 NF2P35240 595 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 KRT76Q01546 638 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 DPY19L2Q6NUT2 758 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 RAD9BQ6WBX8 426 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 NSUN6Q8TEA1 469 aaKnown RBP17.31■□□□□ 0.36
SNX13-204ENST00000444712 EEF2KMTQ96G04 330 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 EDEM3Q9BZQ6 932 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 ADAM9Q13443 819 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 BAATQ14032 418 aaPredicted RBP17.31■□□□□ 0.36
SNX13-204ENST00000444712 VGLL4Q14135 290 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 SYT10Q6XYQ8 523 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 CDHR1Q96JP9 859 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 SYT17Q9BSW7 474 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 FGFBP2Q9BYJ0 223 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 FZD1Q9UP38 647 aa17.31■□□□□ 0.36
SNX13-204ENST00000444712 WDR81Q562E7 1941 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 DDX39AO00148 427 aaKnown RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 GCNT3O95395 438 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 QARSP47897 775 aaKnown RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 ZNF131P52739 623 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 TMEM132BQ14DG7 1078 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 MEA1Q16626 185 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
SNX13-204ENST00000444712 CHST13Q8NET6 341 aa17.3■□□□□ 0.36
SNX13-204ENST00000444712 WNK4Q96J92 1243 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms