RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 SH2D4AQ9H788 454 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
CHFR-204ENST00000443047 SALL4Q9UJQ4 1053 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 STK38LQ9Y2H1 464 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 USP17L5A8MUK1 530 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 STXBP3O00186 592 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 PPIP5K2O43314 1243 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 SMNDC1O75940 238 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHFR-204ENST00000443047 IL1R1P14778 569 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 PTPROQ16827 1216 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 CCDC170Q8IYT3 715 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 SPICE1Q8N0Z3 855 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 PURBQ96QR8 312 aaKnown RBP16.58■□□□□ 0.24
CHFR-204ENST00000443047 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
CHFR-204ENST00000443047 NOP53Q9NZM5 478 aaKnown RBP16.58■□□□□ 0.24
CHFR-204ENST00000443047 CCT8L1PA6NM43 557 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 H7C1D1 291 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 HGSO14964 777 aaPredicted RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 DNAJC8O75937 253 aaPredicted RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 FTCDO95954 541 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 HSD17B3P37058 310 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 CERKQ8TCT0 537 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 LRRC15Q8TF66 581 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 UIMC1Q96RL1 719 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 PIGSQ96S52 555 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 G3BP2Q9UN86 482 aaKnown RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 DAGLAQ9Y4D2 1042 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 SNED1Q8TER0 1413 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 CTNND1O60716 968 aaKnown RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 NAPAP54920 295 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 PPP2R2AP63151 447 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 MEA1Q16626 185 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 PDXDC2PQ6P474 469 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 CERS5Q8N5B7 392 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 CCDC197Q8NCU1 140 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 TUBGCP2Q9BSJ2 902 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 TLR10Q9BXR5 811 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 NUCKS1Q9H1E3 243 aaKnown RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 DDX4Q9NQI0 724 aaKnown RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 FAM207AQ9NSI2 230 aaPredicted RBP16.57■□□□□ 0.24
CHFR-204ENST00000443047 SLC12A6Q9UHW9 1150 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
CHFR-204ENST00000443047 PALM3A6NDB9 673 aaPredicted RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 SMIM24O75264 130 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 EIF4A3P38919 411 aaKnown RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 MAGEA1P43355 309 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 TRAF1Q13077 416 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 LETM2Q2VYF4 491 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 LACTB2Q53H82 288 aaPredicted RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 TAF1DQ9H5J8 278 aaPredicted RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.56■□□□□ 0.242e-7■■■■□ 26
CHFR-204ENST00000443047 RPN1P04843 607 aaKnown RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 RAB27AP51159 221 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 ZBED6P86452 979 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 ITIH3Q06033 890 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 EMC10Q5UCC4 262 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 SLC30A9Q6PML9 568 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 CD302Q8IX05 232 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 ZNF507Q8TCN5 953 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 BORCS6Q96GS4 357 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 KDM4CQ9H3R0 1056 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 EXOC1Q9NV70 894 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 TMEM260Q9NX78 707 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 CALML3P27482 149 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 MTIF2P46199 727 aaKnown RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 DNM2P50570 870 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 CACNB3P54284 484 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 KCNJ2P63252 427 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 ZNF658Q5TYW1 1059 aaPredicted RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 ANKS4BQ8N8V4 417 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 RUBCNQ92622 972 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 BARHL2Q9NY43 387 aa16.56■□□□□ 0.24
CHFR-204ENST00000443047 BIN2Q9UBW5 565 aaPredicted RBP16.56■□□□□ 0.24
CHFR-204ENST00000443047 RASSF10A6NK89 507 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 M0R2N6 131 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
CHFR-204ENST00000443047 RAD51CO43502 376 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 BMP15O95972 392 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 STAT6P42226 847 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 KIF11P52732 1056 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 ZNF844Q08AG5 666 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 KRT71Q3SY84 523 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 KIF2BQ8N4N8 673 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 WHAMMQ8TF30 809 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 ROBO3Q96MS0 1386 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 FAM196BA6NMK8 535 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 A8MUI8 341 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 RAD21O60216 631 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 EVI5O60447 810 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 BBOX1O75936 387 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 ADRA2BP18089 450 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 SHROOM1Q2M3G4 852 aaPredicted RBP16.55■□□□□ 0.24
CHFR-204ENST00000443047 COA7Q96BR5 231 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 MTMR8Q96EF0 704 aa16.55■□□□□ 0.24
CHFR-204ENST00000443047 ELAC2Q9BQ52 826 aaKnown RBP16.55■□□□□ 0.24
CHFR-204ENST00000443047 A0A1W2PQC6 194 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms