RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 ATP8B4Q8TF62 1192 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 LINC01599Q8WXQ3 324 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 SENP7Q9BQF6 1050 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 FTHL17Q9BXU8 183 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 TLE6Q9H808 572 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 TLR9Q9NR96 1032 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 PCDHB15Q9Y5E8 787 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 PLXNA3P51805 1871 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 FRMPD4Q14CM0 1322 aa11.57□□□□□ -0.56
SYN3-204ENST00000441821 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 SPTBN4Q9H254 2564 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 MBLAC1A4D2B0 266 aaPredicted RBP11.56□□□□□ -0.56
SYN3-204ENST00000441821 B4E1Z4 1266 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 FIBPO43427 364 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 GALR2O43603 387 aaPredicted RBP11.56□□□□□ -0.56
SYN3-204ENST00000441821 RPLP2P05387 115 aaKnown RBP11.56□□□□□ -0.56
SYN3-204ENST00000441821 PDE1AP54750 535 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 UBE3AQ05086 875 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 ASCL5Q7RTU5 278 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 ERMP1Q7Z2K6 904 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 RTN4RL1Q86UN2 441 aaPredicted RBP11.56□□□□□ -0.56
SYN3-204ENST00000441821 DNAJB3Q8WWF6 145 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 RIPOR3Q96MK2 946 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 CDCA3Q99618 268 aaPredicted RBP11.56□□□□□ -0.56
SYN3-204ENST00000441821 AGO3Q9H9G7 860 aaKnown RBP11.56□□□□□ -0.56
SYN3-204ENST00000441821 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 CDY2AQ9Y6F7 541 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 SQORQ9Y6N5 450 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 ZDBF2Q9HCK1 2354 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 DMXL1Q9Y485 3027 aa11.56□□□□□ -0.56
SYN3-204ENST00000441821 PALM3A6NDB9 673 aaPredicted RBP11.55□□□□□ -0.56
SYN3-204ENST00000441821 PER2O15055 1255 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 STAG3L1P0CL83 205 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 CD52P31358 61 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 NBL1P41271 181 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 PPFIA1Q13136 1202 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 DUSP6Q16828 381 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 PAN2Q504Q3 1202 aaKnown RBP11.55□□□□□ -0.56
SYN3-204ENST00000441821 IFIT1BQ5T764 474 aaKnown RBP11.55□□□□□ -0.56
SYN3-204ENST00000441821 MICAL1Q8TDZ2 1067 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 NEK1Q96PY6 1258 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 RTEL1Q9NZ71 1219 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
SYN3-204ENST00000441821 MAD2L2Q9UI95 211 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
SYN3-204ENST00000441821 LAMA4Q16363 1823 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 PRR23AA6NEV1 266 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 PDGFBP01127 241 aaPredicted RBP11.54□□□□□ -0.56
SYN3-204ENST00000441821 TCF7P36402 384 aaPredicted RBP11.54□□□□□ -0.56
SYN3-204ENST00000441821 MRPS6P82932 125 aaKnown RBP11.54□□□□□ -0.56
SYN3-204ENST00000441821 SP4Q02446 784 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 GRIK4Q16099 956 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 MARCH8Q5T0T0 291 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 ANKRD45Q5TZF3 282 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 IER5Q5VY09 327 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 TMEM184AQ6ZMB5 413 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 GIMAP8Q8ND71 665 aaPredicted RBP11.54□□□□□ -0.56
SYN3-204ENST00000441821 VN1R2Q8NFZ6 395 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 UBAC1Q9BSL1 405 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 KRT23Q9C075 422 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 S1PR5Q9H228 398 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 RIOX1Q9H6W3 641 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 ERAP1Q9NZ08 941 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 PCDHB12Q9Y5F1 795 aa11.54□□□□□ -0.56
SYN3-204ENST00000441821 DNAH14Q0VDD8 3507 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 DOCK5Q9H7D0 1870 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 CACNA1HO95180 2353 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 NEFLP07196 543 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 SRGAP2BP0DMP2 458 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 SCG2P13521 617 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 RBM10P98175 930 aaKnown RBP11.53□□□□□ -0.56
SYN3-204ENST00000441821 KCNC3Q14003 757 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 SLC35G1Q2M3R5 365 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 PDE12Q6L8Q7 609 aaKnown RBP11.53□□□□□ -0.56
SYN3-204ENST00000441821 XRRA1Q6P2D8 792 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
SYN3-204ENST00000441821 ZBTB33Q86T24 672 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 UBALD2Q8IYN6 164 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 SEPT1Q8WYJ6 367 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 PIGSQ96S52 555 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 CNNM2Q9H8M5 875 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 AAASQ9NRG9 546 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 LRFN2Q9ULH4 789 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 PADI3Q9ULW8 664 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 KAT6AQ92794 2004 aa11.53□□□□□ -0.56
SYN3-204ENST00000441821 PNMA6FA0A0J9YX94 578 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 GSTTP1A0A1W2PQM5 241 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 SDSP20132 328 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 SEC23AQ15436 765 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 IMMTQ16891 758 aaKnown RBP11.52□□□□□ -0.57
SYN3-204ENST00000441821 ANKRD54Q6NXT1 300 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 NLRX1Q86UT6 975 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms