RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PANX2Q96RD6 677 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 HSD17B14Q9BPX1 270 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 LXNQ9BS40 222 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 KCNF1Q9H3M0 494 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 ANKEF1Q9NU02 776 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PKD2L1Q9P0L9 805 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 DBR1Q9UK59 544 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 ZNF214Q9UL59 606 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 PYCARDQ9ULZ3 195 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PCDHB13Q9Y5F0 798 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PHIPQ8WWQ0 1821 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 EIF3DO15371 548 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS50-205ENST00000441602 ABCD1P33897 745 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 TBC1D8BQ0IIM8 1120 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 TMEM132BQ14DG7 1078 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 MIS18BP1Q6P0N0 1132 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 VSIG10LQ86VR7 867 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 MYCT1Q8N699 235 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 CYP2W1Q8TAV3 490 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 BAG1Q99933 345 aaPredicted RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 TUBGCP2Q9BSJ2 902 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 PAGR1Q9BTK6 254 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 MRPL44Q9H9J2 332 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 PARVGQ9HBI0 331 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 METTL14Q9HCE5 456 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 LARSQ9P2J5 1176 aaKnown RBP6.67□□□□□ -1.34
VPS50-205ENST00000441602 FAM184BQ9ULE4 1060 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 SBF1O95248 1867 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 NFASCO94856 1347 aa6.67□□□□□ -1.34
VPS50-205ENST00000441602 LOC102724159A0A0B4J2E5 919 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 TRIM49BA6NDI0 452 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 EML1O00423 815 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 STX10O60499 249 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 IPO7O95373 1038 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 ITGB5P18084 799 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 GUCY2CP25092 1073 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 LRMPQ12912 555 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 GIT2Q14161 759 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 KCTD2Q14681 263 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 PWP2Q15269 919 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 ANKRD40Q6AI12 368 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 KCNV1Q6PIU1 500 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 SFR1Q86XK3 245 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 KIAA0895Q8NCT3 520 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 DRC1Q96MC2 740 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 CYP39A1Q9NYL5 469 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 RGL1Q9NZL6 768 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 COL20A1Q9P218 1284 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 FRMD3A2A2Y4 597 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 H0YCG3 227 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 IRF6O14896 467 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 EIF3JO75822 258 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 CETPP11597 493 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 EHHADHQ08426 723 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 PTPN14Q15678 1187 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 ECM1Q16610 540 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 TMTC1Q8IUR5 882 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 TXLNBQ8N3L3 684 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 C2orf69Q8N8R5 385 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 DUSP9Q99956 384 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 SENP7Q9BQF6 1050 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 REEP2Q9BRK0 252 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 SPATC1LQ9H0A9 340 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 A1CFQ9NQ94 594 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 OLFML3Q9NRN5 406 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 EXOC7Q9UPT5 735 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 LUC7L2Q9Y383 392 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 PCDHA10Q9Y5I2 948 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 PDXKO00764 312 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 SLITRK3O94933 977 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 GCNT3O95395 438 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 MAPTP10636 758 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 EPB41P11171 864 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 TERF1P54274 439 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 HERVK_113P62684 666 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 CCZ1BP86790 482 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 CCZ1P86791 482 aaPredicted RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 TBX2Q13207 712 aaPredicted RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 DGKZQ13574 1117 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 RINT1Q6NUQ1 792 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 FAM178BQ8IXR5 827 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 C4orf19Q8IY42 314 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 SHCBP1Q8NEM2 672 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 IL31RAQ8NI17 732 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 LRRC15Q8TF66 581 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 OPTNQ96CV9 577 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 PRIMPOLQ96LW4 560 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 INPP4AQ96PE3 977 aaPredicted RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 MED15Q96RN5 788 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 MOV10L1Q9BXT6 1211 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 MROH8Q9H579 483 aa6.66□□□□□ -1.34
VPS50-205ENST00000441602 TYW1Q9NV66 732 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 CGNQ9P2M7 1197 aaKnown RBP6.66□□□□□ -1.34
VPS50-205ENST00000441602 GTF2A2P52657 109 aa6.65□□□□□ -1.34
VPS50-205ENST00000441602 LRRC41Q15345 812 aa6.65□□□□□ -1.34
VPS50-205ENST00000441602 KNOP1Q1ED39 458 aaKnown RBP6.65□□□□□ -1.34
VPS50-205ENST00000441602 ARMCX5Q6P1M9 558 aa6.65□□□□□ -1.34
VPS50-205ENST00000441602 PADI6Q6TGC4 694 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms