RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RFC4P35249 363 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 CELF4Q9BZC1 486 aaKnown RBP22.18■■□□□ 1.14
SHOX2-203ENST00000441443 NYXQ9GZU5 481 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 KDM4CQ9H3R0 1056 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 PNMA2Q9UL42 364 aa22.18■■□□□ 1.14
SHOX2-203ENST00000441443 BUB1BO60566 1050 aaPredicted RBP22.17■■□□□ 1.14
SHOX2-203ENST00000441443 PAEPP09466 180 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 MYO1EQ12965 1108 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.17■■□□□ 1.14
SHOX2-203ENST00000441443 CHMP6Q96FZ7 201 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 PSMD1Q99460 953 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 BLOC1S4Q9NUP1 217 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 L3MBTL1Q9Y468 752 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 RTN2O75298 545 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 RPS6KA4O75676 772 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 UNC13DQ70J99 1090 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 GUF1Q8N442 669 aaKnown RBP22.17■■□□□ 1.14
SHOX2-203ENST00000441443 CUL5Q93034 780 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 DYNLL2Q96FJ2 89 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 AHDC1Q5TGY3 1603 aaPredicted RBP22.17■■□□□ 1.14
SHOX2-203ENST00000441443 CCT8L1PA6NM43 557 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 STXBP3O00186 592 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 KRIT1O00522 736 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 GOLGA8HP0CJ92 632 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 NFIXQ14938 502 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 TMC3Q7Z5M5 1100 aa22.17■■□□□ 1.14
SHOX2-203ENST00000441443 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.17■■□□□ 1.14
SHOX2-203ENST00000441443 NOC2LQ9Y3T9 749 aaKnown RBP22.17■■□□□ 1.14
SHOX2-203ENST00000441443 TRAF5O00463 557 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 TTI1O43156 1089 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 PCP11498 1178 aaKnown RBP22.16■■□□□ 1.14
SHOX2-203ENST00000441443 COBLL1Q53SF7 1204 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 ARMC9Q7Z3E5 817 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 TBC1D1Q86TI0 1168 aaPredicted RBP22.16■■□□□ 1.14
SHOX2-203ENST00000441443 NSMCE1Q8WV22 266 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 XPO6Q96QU8 1125 aaKnown RBP22.16■■□□□ 1.14
SHOX2-203ENST00000441443 CICQ96RK0 1608 aaPredicted RBP22.16■■□□□ 1.14
SHOX2-203ENST00000441443 ARAP2Q8WZ64 1704 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 LRRC63Q05C16 580 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 GRB10Q13322 594 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 CCDC197Q8NCU1 140 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 EDEM3Q9BZQ6 932 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 ATP8A1Q9Y2Q0 1164 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 PHLPP1O60346 1717 aa22.16■■□□□ 1.14
SHOX2-203ENST00000441443 TFAP4Q01664 338 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 METTL13Q8N6R0 699 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 CAND2O75155 1236 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 FAM133BQ5BKY9 247 aaKnown RBP22.15■■□□□ 1.14
SHOX2-203ENST00000441443 IL17RBQ9NRM6 502 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 BARHL2Q9NY43 387 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 MAD2L2Q9UI95 211 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 USP21Q9UK80 565 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 F8VZ95 297 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 PGRMC1O00264 195 aaKnown RBP22.15■■□□□ 1.14
SHOX2-203ENST00000441443 PPP1R12AO14974 1030 aaPredicted RBP22.15■■□□□ 1.14
SHOX2-203ENST00000441443 USP11P51784 963 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 MTMR3Q13615 1198 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 FMNL3Q8IVF7 1028 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 CCDC63Q8NA47 563 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 RSRC1Q96IZ7 334 aaKnown RBP22.15■■□□□ 1.14
SHOX2-203ENST00000441443 SELENOSQ9BQE4 189 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 TBC1D7Q9P0N9 293 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 SAP30BPQ9UHR5 308 aaKnown RBP22.15■■□□□ 1.14
SHOX2-203ENST00000441443 COL4A3BPQ9Y5P4 624 aa22.15■■□□□ 1.14
SHOX2-203ENST00000441443 ABCB11O95342 1321 aa22.14■■□□□ 1.14
SHOX2-203ENST00000441443 MYH7BA7E2Y1 1941 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 GHRP10912 638 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 CDC25CP30307 473 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 NBPF9Q3BBW0 867 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 ERMARDQ5T6L9 678 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 EIF1ADQ8N9N8 165 aaKnown RBP22.14■■□□□ 1.13
SHOX2-203ENST00000441443 LARP4BQ92615 738 aaKnown RBP22.14■■□□□ 1.13
SHOX2-203ENST00000441443 TSG101Q99816 390 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 GRIK5Q16478 980 aa22.14■■□□□ 1.13
SHOX2-203ENST00000441443 SMIM23A6NLE4 172 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 CHN1P15882 459 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 ASIC2Q16515 512 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 FAM196AQ6ZSG2 479 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 SLC44A5Q8NCS7 719 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 ACTRT1Q8TDG2 376 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 SYN2Q92777 582 aaPredicted RBP22.13■■□□□ 1.13
SHOX2-203ENST00000441443 CDK5RAP3Q96JB5 506 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 PNMA5Q96PV4 448 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 ANKRD2Q9GZV1 360 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 NUCKS1Q9H1E3 243 aaKnown RBP22.13■■□□□ 1.13
SHOX2-203ENST00000441443 SWAP70Q9UH65 585 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 NAPAP54920 295 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 PTK2Q05397 1052 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 SLC10A5Q5PT55 438 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 DDX12PQ92771 950 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 P3H4Q92791 437 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 PBKQ96KB5 322 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.13■■□□□ 1.131e-6■□□□□ 9.9
SHOX2-203ENST00000441443 TRIM51Q9BSJ1 452 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 FAM129AQ9BZQ8 928 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 MYH1P12882 1939 aa22.13■■□□□ 1.13
SHOX2-203ENST00000441443 CNTNAP4Q9C0A0 1308 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 TLDC2A0PJX2 215 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 USP17L3A6NCW0 530 aa22.12■■□□□ 1.13
SHOX2-203ENST00000441443 USP17L4A6NCW7 530 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms