RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GFPT1Q06210 699 aaPredicted RBP18.36■□□□□ 0.53
PMS1-213ENST00000441310 ERICH1Q86X53 443 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 THAP9Q9H5L6 903 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 FBXL5Q9UKA1 691 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 AGAP1Q9UPQ3 857 aa18.36■□□□□ 0.53
PMS1-213ENST00000441310 NEFHP12036 1026 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 BTDP43251 543 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 TMTC3Q6ZXV5 915 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 RETREG2Q8NC44 543 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
PMS1-213ENST00000441310 PLIN2Q99541 437 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 EPHB6O15197 1021 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 EVI5O60447 810 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 ABL2P42684 1182 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 RIPK1Q13546 671 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 TXNRD1Q16881 649 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 TTC38Q5R3I4 469 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 C12orf60Q5U649 245 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 TRIM68Q6AZZ1 485 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 CNOT6LQ96LI5 555 aaKnown RBP18.35■□□□□ 0.53
PMS1-213ENST00000441310 SLC12A4Q9UP95 1085 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 STK38LQ9Y2H1 464 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 TIAM2Q8IVF5 1701 aa18.35■□□□□ 0.53
PMS1-213ENST00000441310 PSMA7O14818 248 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 GOLGA8HP0CJ92 632 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 XBP1P17861 261 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 KRT2P35908 639 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 FLT3P36888 993 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 SLC1A4P43007 532 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 BLMHQ13867 455 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 RBM17Q96I25 401 aaKnown RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 XPO6Q96QU8 1125 aaKnown RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 MXD3Q9BW11 206 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 OSBPL1AQ9BXW6 950 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 BAG3O95817 575 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 FGRP09769 529 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 GNAT1P11488 350 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 GTF2IP78347 998 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 EHHADHQ08426 723 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 LRRC45Q96CN5 670 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 ELAC2Q9BQ52 826 aaKnown RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 NEUROG2Q9H2A3 272 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 PALMO75781 387 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 PAEPP09466 180 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 CTCFP49711 727 aaPredicted RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 SLMAPQ14BN4 828 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 ZC3H12AQ5D1E8 599 aaKnown RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 MTA3Q9BTC8 594 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
PMS1-213ENST00000441310 NHSQ6T4R5 1651 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 THSD7AQ9UPZ6 1657 aa18.34■□□□□ 0.53
PMS1-213ENST00000441310 SMIM24O75264 130 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 TSPY3P0CV98 308 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 TSPY8P0CW00 308 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 PRPHP41219 470 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 STAT6P42226 847 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 NLRP5P59047 1200 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 RRAGAQ7L523 313 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 ZNF444Q8N0Y2 327 aaPredicted RBP18.33■□□□□ 0.53
PMS1-213ENST00000441310 KIF2BQ8N4N8 673 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 RASGRP4Q8TDF6 673 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 TSC22D3Q99576 134 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 SELENOSQ9BQE4 189 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 ZCWPW1Q9H0M4 648 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 MMRN2Q9H8L6 949 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 ZFATQ9P243 1243 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 SWAP70Q9UH65 585 aa18.33■□□□□ 0.53
PMS1-213ENST00000441310 DUOX1Q9NRD9 1551 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 MCM7P33993 719 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 PAPOLAP51003 745 aaKnown RBP18.33■□□□□ 0.52
PMS1-213ENST00000441310 PTPROQ16827 1216 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 PNMA1Q8ND90 353 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 TBC1D16Q8TBP0 767 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 PLCD4Q9BRC7 762 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 ABCF3Q9NUQ8 709 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 PLAGL2Q9UPG8 496 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 PCDHGC5Q9Y5F6 944 aa18.33■□□□□ 0.52
PMS1-213ENST00000441310 CLSTN1O94985 981 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 ADRA2BP18089 450 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 ATP4AP20648 1035 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 TNNC1P63316 161 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 PICALMQ13492 652 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 PIK3AP1Q6ZUJ8 805 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 ISCUQ9H1K1 167 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 PAPOLBQ9NRJ5 636 aaKnown RBP18.32■□□□□ 0.52
PMS1-213ENST00000441310 PNMA2Q9UL42 364 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 TAF1LQ8IZX4 1826 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 AHCYL1O43865 530 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 FESP07332 822 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 NQO1P15559 274 aaKnown RBP18.32■□□□□ 0.52
PMS1-213ENST00000441310 CDK17Q00537 523 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 TAF11Q15544 211 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
PMS1-213ENST00000441310 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
PMS1-213ENST00000441310 ANKRD20A2Q5SQ80 823 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms