RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 NEK9Q8TD19 979 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 REEP2Q9BRK0 252 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 FGFBP2Q9BYJ0 223 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 PANK4Q9NVE7 773 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 TBC1D7Q9P0N9 293 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 TMEM150BA6NC51 233 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 JAK3P52333 1124 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 PMS1P54277 932 aaKnown RBP21.25■□□□□ 0.99
SNX17-203ENST00000440760 EHHADHQ08426 723 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 FAM110CQ1W6H9 321 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 ZHX3Q9H4I2 956 aa21.25■□□□□ 0.99
SNX17-203ENST00000440760 BMP2KQ9NSY1 1161 aaPredicted RBP21.25■□□□□ 0.99
SNX17-203ENST00000440760 RSPH10B2B2RC85 870 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 RSPH10BP0C881 870 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 UBA1P22314 1058 aaKnown RBP21.24■□□□□ 0.99
SNX17-203ENST00000440760 ICAM3P32942 547 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 TAF1CQ15572 869 aaPredicted RBP21.24■□□□□ 0.99
SNX17-203ENST00000440760 ZNF746Q6NUN9 644 aaPredicted RBP21.24■□□□□ 0.99
SNX17-203ENST00000440760 CYFIP1Q7L576 1253 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 FBXO16Q8IX29 292 aaPredicted RBP21.24■□□□□ 0.99
SNX17-203ENST00000440760 SPC24Q8NBT2 197 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 NACC1Q96RE7 527 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 ZIC5Q96T25 663 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 SH2D3AQ9BRG2 576 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 SLC9A2Q9UBY0 812 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 NFASCO94856 1347 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 ADGRA2Q96PE1 1338 aa21.24■□□□□ 0.99
SNX17-203ENST00000440760 QARSP47897 775 aaKnown RBP21.23■□□□□ 0.99
SNX17-203ENST00000440760 GIT2Q14161 759 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 LRRC41Q15345 812 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 RINT1Q6NUQ1 792 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 GPR142Q7Z601 462 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 ZSWIM4Q9H7M6 989 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 RWDD2AQ9UIY3 292 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 MUTP22033 750 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 SFNP31947 248 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 CT47A1Q5JQC4 288 aaPredicted RBP21.23■□□□□ 0.99
SNX17-203ENST00000440760 SPATA1Q5VX52 437 aa21.23■□□□□ 0.99
SNX17-203ENST00000440760 ARIH2O95376 493 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 ZNF18P17022 549 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 ACTR2P61160 394 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 FANCCQ00597 558 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 STIM1Q13586 685 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 FAM26FQ5R3K3 315 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 PAXIP1Q6ZW49 1069 aaPredicted RBP21.22■□□□□ 0.99
SNX17-203ENST00000440760 CCDC65Q8IXS2 484 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 IFNKQ9P0W0 207 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 PCDHA10Q9Y5I2 948 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 IVNS1ABPQ9Y6Y0 642 aa21.22■□□□□ 0.99
SNX17-203ENST00000440760 PSMA7O14818 248 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 IFNL1Q8IU54 200 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 KCTD17Q8N5Z5 321 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 SENP7Q9BQF6 1050 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 GABBR1Q9UBS5 961 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 ARID2Q68CP9 1835 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 DOCK3Q8IZD9 2030 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 MYH11P35749 1972 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 FRMD3A2A2Y4 597 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 ARHGEF35A5YM69 484 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 LY6KQ17RY6 165 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 ZNF792Q3KQV3 632 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 HERC4Q5GLZ8 1057 aaPredicted RBP21.21■□□□□ 0.99
SNX17-203ENST00000440760 UTP14CQ5TAP6 766 aaKnown RBP21.21■□□□□ 0.99
SNX17-203ENST00000440760 PLA2G4FQ68DD2 849 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 C1orf186Q6ZWK4 172 aa21.21■□□□□ 0.99
SNX17-203ENST00000440760 CCDC60Q8IWA6 550 aaPredicted RBP21.21■□□□□ 0.99
SNX17-203ENST00000440760 MPHOSPH6Q99547 160 aaKnown RBP21.21■□□□□ 0.99
SNX17-203ENST00000440760 XPO4Q9C0E2 1151 aaKnown RBP21.21■□□□□ 0.99
SNX17-203ENST00000440760 MYH9P35579 1960 aaKnown RBP21.2■□□□□ 0.98
SNX17-203ENST00000440760 TMEM88BA6NKF7 163 aa21.2■□□□□ 0.98
SNX17-203ENST00000440760 PSMC5P62195 406 aa21.2■□□□□ 0.98
SNX17-203ENST00000440760 TPD52L1Q16890 204 aaPredicted RBP21.2■□□□□ 0.98
SNX17-203ENST00000440760 ARMCX2Q7L311 632 aa21.2■□□□□ 0.98
SNX17-203ENST00000440760 SFR1Q86XK3 245 aa21.2■□□□□ 0.98
SNX17-203ENST00000440760 SMAP1Q8IYB5 467 aaPredicted RBP21.2■□□□□ 0.98
SNX17-203ENST00000440760 PCDHA2Q9Y5H9 948 aa21.2■□□□□ 0.98
SNX17-203ENST00000440760 SFI1A8K8P3 1242 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 B4DLN1 442 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 PTGS1P23219 599 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 YWHABP31946 246 aaKnown RBP21.19■□□□□ 0.98
SNX17-203ENST00000440760 TMEM63BQ5T3F8 832 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 SWSAP1Q6NVH7 229 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 RDM1Q8NG50 284 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 ZNF862O60290 1169 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 TBCAO75347 108 aaKnown RBP21.19■□□□□ 0.98
SNX17-203ENST00000440760 FARP2O94887 1054 aaPredicted RBP21.19■□□□□ 0.98
SNX17-203ENST00000440760 SERPINC1P01008 464 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 PTMAP06454 111 aaKnown RBP21.19■□□□□ 0.98
SNX17-203ENST00000440760 RARRES1P49788 294 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 GRB14Q14449 540 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 CYP4F22Q6NT55 531 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 TTI2Q6NXR4 508 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 ABHD15Q6UXT9 468 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 PLEKHH3Q7Z736 793 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 P2RX5Q93086 422 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 EEF2KMTQ96G04 330 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 TRIM47Q96LD4 638 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 PDGFCQ9NRA1 345 aa21.19■□□□□ 0.98
SNX17-203ENST00000440760 BACH1O14867 736 aa21.18■□□□□ 0.98
SNX17-203ENST00000440760 LYPLA2O95372 231 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms