RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 DGKDQ16760 1214 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 SPECC1Q5M775 1068 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 RRAGBQ5VZM2 374 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 USP49Q70CQ1 688 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 PLPPR4Q7Z2D5 763 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 CATSPER3Q86XQ3 398 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 C4orf19Q8IY42 314 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 FMR1NBQ8N0W7 255 aaPredicted RBP14.21□□□□□ -0.13
SCLT1-202ENST00000439369 IQUBQ8NA54 791 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 AFG1LQ8WV93 481 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 COPS5Q92905 334 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 ARMC5Q96C12 935 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 CCDC34Q96HJ3 373 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 TIGD1Q96MW7 591 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 AZI2Q9H6S1 392 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
SCLT1-202ENST00000439369 A0A1B0GVL5 298 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-202ENST00000439369 ZEB2O60315 1214 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 MED24O75448 989 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 MMP3P08254 477 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 CDC25AP30304 524 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 NDUFA8P51970 172 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 GRB10Q13322 594 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 NFKBIBQ15653 356 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 TMEM63BQ5T3F8 832 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 GJC2Q5T442 439 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-202ENST00000439369 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 ELOA2Q8IYF1 753 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-202ENST00000439369 RASSF8Q8NHQ8 419 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 DYDC2Q96IM9 177 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 FAM167AQ96KS9 214 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 NACC1Q96RE7 527 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 LXNQ9BS40 222 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.2□□□□□ -0.14
SCLT1-202ENST00000439369 GOLPH3LQ9H4A5 285 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 SMARCAD1Q9H4L7 1026 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 XPNPEP3Q9NQH7 507 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 ZNF302Q9NR11 478 aa14.2□□□□□ -0.14
SCLT1-202ENST00000439369 DDX19AQ9NUU7 478 aaKnown RBP14.2□□□□□ -0.14
SCLT1-202ENST00000439369 MAFBQ9Y5Q3 323 aaPredicted RBP14.2□□□□□ -0.14
SCLT1-202ENST00000439369 SYNRGQ9UMZ2 1314 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 BACH1O14867 736 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 POLR2DO15514 142 aaKnown RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 KINO60870 393 aaKnown RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 SLFN14P0C7P3 912 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 PLCG1P19174 1290 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 STAT6P42226 847 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 STAT5BP51692 787 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 SP4Q02446 784 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 SNW1Q13573 536 aaKnown RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 KARSQ15046 597 aaKnown RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 E2F4Q16254 413 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 FSCN1Q16658 493 aaKnown RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 XKR3Q5GH77 459 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 SWSAP1Q6NVH7 229 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 KANK3Q6NY19 840 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 CCDC60Q8IWA6 550 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 SH3TC2Q8TF17 1288 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 PNMA5Q96PV4 448 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 PAK6Q9NQU5 681 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 ANKEF1Q9NU02 776 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 ERAP1Q9NZ08 941 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 RGL1Q9NZL6 768 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 GABBR1Q9UBS5 961 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 DBR1Q9UK59 544 aaKnown RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 ZNF215Q9UL58 517 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-202ENST00000439369 DNM3Q9UQ16 869 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 PPME1Q9Y570 386 aa14.19□□□□□ -0.14
SCLT1-202ENST00000439369 CTAGE5O15320 804 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 ADAMTS4O75173 837 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 ZNF202O95125 648 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 LGALS2P05162 132 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 LIG1P18858 919 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 KLHL40Q2TBA0 621 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 LHX8Q68G74 356 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 PDXDC2PQ6P474 469 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 OTUD6AQ7L8S5 288 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 RNF180Q86T96 592 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 TPH2Q8IWU9 490 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 CEP57L1Q8IYX8 460 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 PCSK9Q8NBP7 692 aaKnown RBP14.18□□□□□ -0.14
SCLT1-202ENST00000439369 BANK1Q8NDB2 785 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 KLHDC9Q8NEP7 349 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 ZNF333Q96JL9 665 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 PCYT2Q99447 389 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 LRRC27Q9C0I9 530 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 HOOK1Q9UJC3 728 aaKnown RBP14.18□□□□□ -0.14
SCLT1-202ENST00000439369 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
SCLT1-202ENST00000439369 DOCK5Q9H7D0 1870 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 A0A087X0B3 334 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 ACTN4O43707 911 aaKnown RBP14.17□□□□□ -0.14
SCLT1-202ENST00000439369 ZNF862O60290 1169 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 SORBS3O60504 671 aa14.17□□□□□ -0.14
SCLT1-202ENST00000439369 NR1I2O75469 434 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms