RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PTK2Q05397 1052 aa16.89■□□□□ 0.29
APP-208ENST00000439274 CRY2Q49AN0 593 aa16.89■□□□□ 0.29
APP-208ENST00000439274 ZNF772Q68DY9 489 aaPredicted RBP16.89■□□□□ 0.29
APP-208ENST00000439274 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
APP-208ENST00000439274 LUC7LQ9NQ29 371 aaKnown RBP16.89■□□□□ 0.29
APP-208ENST00000439274 AIPL1Q9NZN9 384 aa16.89■□□□□ 0.29
APP-208ENST00000439274 GCFC2P16383 781 aaKnown RBP16.89■□□□□ 0.29
APP-208ENST00000439274 SCNN1DP51172 638 aa16.89■□□□□ 0.29
APP-208ENST00000439274 NNTQ13423 1086 aa16.89■□□□□ 0.29
APP-208ENST00000439274 CERS5Q8N5B7 392 aa16.89■□□□□ 0.29
APP-208ENST00000439274 PROCA1Q8NCQ7 364 aaPredicted RBP16.89■□□□□ 0.29
APP-208ENST00000439274 PIK3R5Q8WYR1 880 aa16.89■□□□□ 0.29
APP-208ENST00000439274 BCAS3Q9H6U6 928 aa16.89■□□□□ 0.29
APP-208ENST00000439274 RNF14Q9UBS8 474 aa16.89■□□□□ 0.29
APP-208ENST00000439274 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
APP-208ENST00000439274 SAMM50Q9Y512 469 aa16.89■□□□□ 0.29
APP-208ENST00000439274 RAD51CO43502 376 aa16.88■□□□□ 0.29
APP-208ENST00000439274 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
APP-208ENST00000439274 PAK2Q13177 524 aa16.88■□□□□ 0.29
APP-208ENST00000439274 CFAP58Q5T655 872 aa16.88■□□□□ 0.29
APP-208ENST00000439274 GBP6Q6ZN66 633 aa16.88■□□□□ 0.29
APP-208ENST00000439274 ZNF571Q7Z3V5 609 aaPredicted RBP16.88■□□□□ 0.29
APP-208ENST00000439274 RBM17Q96I25 401 aaKnown RBP16.88■□□□□ 0.29
APP-208ENST00000439274 USP40Q9NVE5 1235 aa16.88■□□□□ 0.29
APP-208ENST00000439274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.88■□□□□ 0.29
APP-208ENST00000439274 KCNK3O14649 394 aa16.88■□□□□ 0.29
APP-208ENST00000439274 CETN3O15182 167 aa16.88■□□□□ 0.29
APP-208ENST00000439274 HOXA7P31268 230 aaPredicted RBP16.88■□□□□ 0.29
APP-208ENST00000439274 SNAP25P60880 206 aa16.88■□□□□ 0.29
APP-208ENST00000439274 QRICH1Q2TAL8 776 aa16.88■□□□□ 0.29
APP-208ENST00000439274 IQCKQ8N0W5 287 aa16.88■□□□□ 0.29
APP-208ENST00000439274 KCNMB3Q9NPA1 279 aa16.88■□□□□ 0.29
APP-208ENST00000439274 FOCADQ5VW36 1801 aa16.87■□□□□ 0.29
APP-208ENST00000439274 FAM196BA6NMK8 535 aa16.87■□□□□ 0.29
APP-208ENST00000439274 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
APP-208ENST00000439274 TTC31Q49AM3 519 aaPredicted RBP16.87■□□□□ 0.29
APP-208ENST00000439274 DPY19L2P1Q6NXN4 242 aa16.87■□□□□ 0.29
APP-208ENST00000439274 P2RX7Q99572 595 aaKnown RBP16.87■□□□□ 0.29
APP-208ENST00000439274 ANO3Q9BYT9 981 aa16.87■□□□□ 0.29
APP-208ENST00000439274 DHX36Q9H2U1 1008 aaKnown RBP16.87■□□□□ 0.29
APP-208ENST00000439274 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
APP-208ENST00000439274 SERPINB2P05120 415 aa16.87■□□□□ 0.29
APP-208ENST00000439274 HOXD13P35453 343 aa16.87■□□□□ 0.29
APP-208ENST00000439274 SLC27A3Q5K4L6 730 aa16.87■□□□□ 0.29
APP-208ENST00000439274 GPATCH4Q5T3I0 446 aaKnown RBP16.87■□□□□ 0.29
APP-208ENST00000439274 IRF2BP2Q7Z5L9 587 aa16.87■□□□□ 0.29
APP-208ENST00000439274 CATSPER3Q86XQ3 398 aa16.87■□□□□ 0.29
APP-208ENST00000439274 ZC3H3Q8IXZ2 948 aaKnown RBP16.87■□□□□ 0.29
APP-208ENST00000439274 USP38Q8NB14 1042 aa16.87■□□□□ 0.29
APP-208ENST00000439274 PCDHA1Q9Y5I3 950 aa16.87■□□□□ 0.29
APP-208ENST00000439274 EBAG9O00559 213 aa16.86■□□□□ 0.29
APP-208ENST00000439274 TAL1P17542 331 aaPredicted RBP16.86■□□□□ 0.29
APP-208ENST00000439274 SKOR1P84550 965 aa16.86■□□□□ 0.29
APP-208ENST00000439274 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
APP-208ENST00000439274 ZFPM1Q8IX07 1006 aa16.86■□□□□ 0.29
APP-208ENST00000439274 PPM1EQ8WY54 764 aa16.86■□□□□ 0.29
APP-208ENST00000439274 AJAP1Q9UKB5 411 aaPredicted RBP16.86■□□□□ 0.29
APP-208ENST00000439274 FAM169AQ9Y6X4 670 aa16.86■□□□□ 0.29
APP-208ENST00000439274 FRMD3A2A2Y4 597 aa16.86■□□□□ 0.29
APP-208ENST00000439274 MYBP10242 640 aa16.86■□□□□ 0.29
APP-208ENST00000439274 UCHL3P15374 230 aa16.86■□□□□ 0.29
APP-208ENST00000439274 NOP2P46087 812 aaKnown RBP16.86■□□□□ 0.29
APP-208ENST00000439274 PPARDQ03181 441 aa16.86■□□□□ 0.29
APP-208ENST00000439274 NFIAQ12857 509 aa16.86■□□□□ 0.29
APP-208ENST00000439274 PRR16Q569H4 304 aa16.86■□□□□ 0.29
APP-208ENST00000439274 DCAF17Q5H9S7 520 aaPredicted RBP16.86■□□□□ 0.29
APP-208ENST00000439274 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
APP-208ENST00000439274 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
APP-208ENST00000439274 RNPC3Q96LT9 517 aaKnown RBP16.86■□□□□ 0.29
APP-208ENST00000439274 SPAG5Q96R06 1193 aa16.86■□□□□ 0.29
APP-208ENST00000439274 SHTN1A0MZ66 631 aa16.85■□□□□ 0.29
APP-208ENST00000439274 ZEB2O60315 1214 aa16.85■□□□□ 0.29
APP-208ENST00000439274 GIT2Q14161 759 aa16.85■□□□□ 0.29
APP-208ENST00000439274 RPS6KA1Q15418 735 aa16.85■□□□□ 0.29
APP-208ENST00000439274 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
APP-208ENST00000439274 EFCAB13Q8IY85 973 aa16.85■□□□□ 0.29
APP-208ENST00000439274 TAF4BQ92750 862 aa16.85■□□□□ 0.29
APP-208ENST00000439274 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
APP-208ENST00000439274 ARMCX3Q9UH62 379 aaPredicted RBP16.85■□□□□ 0.29
APP-208ENST00000439274 FAM170AA1A519 330 aa16.85■□□□□ 0.29
APP-208ENST00000439274 RSPH10B2B2RC85 870 aa16.85■□□□□ 0.29
APP-208ENST00000439274 RSPH10BP0C881 870 aa16.85■□□□□ 0.29
APP-208ENST00000439274 ADRA2BP18089 450 aa16.85■□□□□ 0.29
APP-208ENST00000439274 PON1P27169 355 aa16.85■□□□□ 0.29
APP-208ENST00000439274 LIG3P49916 1009 aa16.85■□□□□ 0.29
APP-208ENST00000439274 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
APP-208ENST00000439274 GUCY1A3Q02108 690 aa16.85■□□□□ 0.29
APP-208ENST00000439274 GJB7Q6PEY0 223 aa16.85■□□□□ 0.29
APP-208ENST00000439274 TADA2BQ86TJ2 420 aa16.85■□□□□ 0.29
APP-208ENST00000439274 MICALL1Q8N3F8 863 aa16.85■□□□□ 0.29
APP-208ENST00000439274 AP1M1Q9BXS5 423 aa16.85■□□□□ 0.29
APP-208ENST00000439274 RGS17Q9UGC6 210 aaPredicted RBP16.85■□□□□ 0.29
APP-208ENST00000439274 SWAP70Q9UH65 585 aa16.85■□□□□ 0.29
APP-208ENST00000439274 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
APP-208ENST00000439274 CEP104O60308 925 aa16.84■□□□□ 0.29
APP-208ENST00000439274 BBOX1O75936 387 aa16.84■□□□□ 0.29
APP-208ENST00000439274 AKAP3O75969 853 aa16.84■□□□□ 0.29
APP-208ENST00000439274 KIF4AO95239 1232 aa16.84■□□□□ 0.29
APP-208ENST00000439274 GYS1P13807 737 aa16.84■□□□□ 0.29
APP-208ENST00000439274 SPIRE1Q08AE8 756 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms