RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
HDAC8-214ENST00000439122 RSPH10B2B2RC85 870 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 BUB1O43683 1085 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 ZMYND10O75800 440 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 RSPH10BP0C881 870 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 MYBP10242 640 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 CYP2C19P33261 490 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 CREG2Q8IUH2 290 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 ZC3H3Q8IXZ2 948 aaKnown RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 ACER1Q8TDN7 264 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 COG1Q8WTW3 980 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 HERC5Q9UII4 1024 aaKnown RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 HDAC9Q9UKV0 1011 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 ZNF646O15015 1829 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 TARSL2A2RTX5 802 aaKnown RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 PIK3CDO00329 1044 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 EML1O00423 815 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 PJA2O43164 708 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 C21orf2O43822 256 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 CXCR5P32302 372 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 KIAA1755Q5JYT7 1200 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 NFRKBQ6P4R8 1299 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 CCDC174Q6PII3 467 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 SAMD1Q6SPF0 538 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 NOX5Q96PH1 765 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 OSBPL9Q96SU4 736 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 RUSC1Q9BVN2 902 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-214ENST00000439122 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
HDAC8-214ENST00000439122 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CHMP2AO43633 222 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 GCNT3O95395 438 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CYP3A4P08684 503 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 HOXD13P35453 343 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 TNNT3P45378 269 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 MAP9Q49MG5 647 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 FAM133AQ8N9E0 248 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 PIGOQ8TEQ8 1089 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 TBC1D5Q92609 795 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CCDC102AQ96A19 550 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 TRAF3IP3Q9Y228 551 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 RBAK-RBAKDNI3L0D1 243 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 NCK2O43639 380 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CALUO43852 315 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 N4BP1O75113 896 aaKnown RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 KLHL30Q0D2K2 578 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CCDC181Q5TID7 509 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 CCDC70Q6NSX1 233 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 EPM2AIP1Q7L775 607 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 POLR3CQ9BUI4 534 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 GOPCQ9HD26 462 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 LUC7LQ9NQ29 371 aaKnown RBP13.34□□□□□ -0.27
HDAC8-214ENST00000439122 VPS18Q9P253 973 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 HYOU1Q9Y4L1 999 aa13.34□□□□□ -0.27
HDAC8-214ENST00000439122 IGLV3-22A0A075B6J6 115 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 SFI1A8K8P3 1242 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 EYA4O95677 639 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 ACTN1P12814 892 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 XRCC5P13010 732 aaKnown RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 PRLRP16471 622 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 TCP1P17987 556 aaKnown RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 UBXN2AP68543 259 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 DCAF17Q5H9S7 520 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 LRCH2Q5VUJ6 765 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 TPH2Q8IWU9 490 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 MSL3Q8N5Y2 521 aaKnown RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 HINFPQ9BQA5 517 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 BCAS3Q9H6U6 928 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 ADAMTS1Q9UHI8 967 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 GCOM1H8Y6P7 765 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 PDXKO00764 312 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 RAD17O75943 681 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 AFPP02771 609 aaKnown RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 POLR2MP0CAP2 368 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 TRAF1Q13077 416 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 ZYXQ15942 572 aaKnown RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 ASIC2Q16515 512 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 SLC18A3Q16572 532 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 TCERG1LQ5VWI1 586 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 RNF10Q8N5U6 811 aaKnown RBP13.33□□□□□ -0.28
HDAC8-214ENST00000439122 GDAP1L1Q96MZ0 367 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 WDR18Q9BV38 432 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 GANQ9H2C0 597 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 ACBD3Q9H3P7 528 aa13.33□□□□□ -0.28
HDAC8-214ENST00000439122 ADAM21Q9UKJ8 722 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms