RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CEP83Q9Y592 693 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 ANKRD62A6NC57 917 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 ZMYND10O75800 440 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 RPS12P25398 132 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 PTPROQ16827 1216 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 PPM1KQ8N3J5 372 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 DYDC1Q8WWB3 177 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 PANX2Q96RD6 677 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 EIF2AK1Q9BQI3 630 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 PHLPP2Q6ZVD8 1323 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 A0A0U1RQJ8 604 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 AFPP02771 609 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 STK4Q13043 487 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 MTF1Q14872 753 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 MTERF2Q49AM1 385 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 TTC19Q6DKK2 380 aaPredicted RBP12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 NSUN6Q8TEA1 469 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 U2AF1L4Q8WU68 220 aaKnown RBP12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 IDI2Q9BXS1 227 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 KMT5AQ9NQR1 393 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 PCDHAC2Q9Y5I4 1007 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 CAP2P40123 477 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 SAR1BQ9Y6B6 198 aa12.65□□□□□ -0.38
TRAPPC9-202ENST00000438773 SLC37A4O43826 429 aa12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 TFRCP02786 760 aaKnown RBP12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 ABCB4P21439 1286 aa12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 OSBPP22059 807 aa12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 CCNA1P78396 465 aa12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 CTTNBP2NLQ9P2B4 639 aa12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 HACL1Q9UJ83 578 aa12.65□□□□□ -0.39
TRAPPC9-202ENST00000438773 GOLGA6L7A0A1B0GV03 622 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 H0YCG3 227 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 SPOPO43791 374 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 FDX1P10109 184 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 BMP6P22004 513 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 HOXA7P31268 230 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 TBC1D22BQ9NU19 505 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 MYMKA6NI61 221 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 PEX3P56589 373 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 CYP27A1Q02318 531 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 ADSSL1Q8N142 457 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 WDR64B1ANS9 1081 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 TTC31Q49AM3 519 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 FAM160B1Q5W0V3 765 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 MIS18BP1Q6P0N0 1132 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 CC2D1AQ6P1N0 951 aaPredicted RBP12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 PADI6Q6TGC4 694 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 ZBTB8OSQ8IWT0 167 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 SLC35F6Q8N357 371 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 TRIM58Q8NG06 486 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
TRAPPC9-202ENST00000438773 TLDC2A0PJX2 215 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 BUB1O43683 1085 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 RHOBTB3O94955 611 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 TUBBP07437 444 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 IGBP1P78318 339 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 COG2Q14746 738 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 SLC51AQ86UW1 340 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 LXNQ9BS40 222 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 PARD6BQ9BYG5 372 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 ANKFY1Q9P2R3 1169 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 EFCAB8A8MWE9 144 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 ONECUT3O60422 494 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 N4BP1O75113 896 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 PSAPP07602 524 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 HPDP32754 393 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 TMEM206Q9H813 350 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 MYH15Q9Y2K3 1946 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 NDUFA10O95299 355 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 P4HBP07237 508 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 QARSP47897 775 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 VAV2P52735 878 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 TNNC1P63316 161 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 MRPS25P82663 173 aaKnown RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 SEMA3FQ13275 785 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 PROM2Q8N271 834 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 ZNF384Q8TF68 577 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 C7orf25Q9BPX7 421 aa12.63□□□□□ -0.39
TRAPPC9-202ENST00000438773 EBAG9O00559 213 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 CEP104O60308 925 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 KRT19P08727 400 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 LMNB1P20700 586 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 ACAD9Q9H845 621 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 FAM198AQ9UFP1 575 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 FBXO40Q9UH90 709 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 CTNND1O60716 968 aaKnown RBP12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 H2AFZP0C0S5 128 aa12.62□□□□□ -0.39
TRAPPC9-202ENST00000438773 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms