RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CROTQ9UKG9 612 aa5□□□□□ -1.61
HMGB3P12-201ENST00000438745 B4GALT3O60512 393 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 CLASP2O75122 1294 aaKnown RBP4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 PLATP00750 562 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 SRGAP2CP0DJJ0 459 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 PTPN1P18031 435 aaKnown RBP4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 SMAD2Q15796 467 aaKnown RBP4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 NFE2L2Q16236 605 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 CRY1Q16526 586 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 SKIDA1Q1XH10 827 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 TBC1D10BQ4KMP7 808 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 ERICH6BQ5W0A0 696 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 BTBD8Q5XKL5 378 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 HHIPL2Q6UWX4 724 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 FAM124AQ86V42 546 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 KLHL36Q8N4N3 616 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 IGDCC4Q8TDY8 1250 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 MAGEB10Q96LZ2 347 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 CELF4Q9BZC1 486 aaKnown RBP4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 TMEM168Q9H0V1 697 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 L2HGDHQ9H9P8 463 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 TRIM39Q9HCM9 518 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 CATSPERZQ9NTU4 200 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 INVSQ9Y283 1065 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 PTCH2Q9Y6C5 1203 aa4.99□□□□□ -1.61
HMGB3P12-201ENST00000438745 ARHGEF11O15085 1522 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 NESP48681 1621 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 TCRBV16S1A1N1A0A5B0 115 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 CCDC66A2RUB6 948 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 PLD2O14939 933 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 NPTXRO95502 500 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 GJA4P35212 333 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 NFKB2Q00653 900 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 PLP2Q04941 152 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 NFATC3Q12968 1075 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 FAM47CQ5HY64 1035 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 FIGNQ5HY92 759 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 BORAQ6PGQ7 559 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 OVCH1Q7RTY7 1134 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 PTRH1Q86Y79 214 aaKnown RBP4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZC3H7AQ8IWR0 971 aaKnown RBP4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 AJUBAQ96IF1 538 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 BDH2Q9BUT1 245 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 NCOA5Q9HCD5 579 aaKnown RBP4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 ARHGAP20Q9P2F6 1191 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 NDOR1Q9UHB4 597 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 ADAM29Q9UKF5 820 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 ATP23Q9Y6H3 246 aa4.98□□□□□ -1.61
HMGB3P12-201ENST00000438745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 RASGRP1O95267 797 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 C4BPAP04003 597 aaKnown RBP4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 CYP1A1P04798 512 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 HERVK_113P62684 666 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 ST5P78524 1137 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 SQSTM1Q13501 440 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 SURF1Q15526 300 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 PHF19Q5T6S3 580 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 ABHD17CQ6PCB6 329 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 TRMT10BQ6PF06 316 aaKnown RBP4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 FGD2Q7Z6J4 655 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 NUDT10Q8NFP7 164 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 CLUHP3Q96NS8 147 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 KATNBL1Q9H079 304 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 FTSJ1Q9UET6 329 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 ZFP69BQ9UJL9 534 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 MYO15BQ96JP2 1530 aa4.97□□□□□ -1.61
HMGB3P12-201ENST00000438745 SEC23AQ15436 765 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 FNDC3BQ53EP0 1204 aaKnown RBP4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 Q6ZUG5 572 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 BRAPQ7Z569 592 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 NOSTRINQ8IVI9 506 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 STPG3Q8N7X2 389 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 FBXO41Q8TF61 875 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 DLG3Q92796 817 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 KANSL2Q9H9L4 492 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 SLC39A2Q9NP94 309 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 RIC8BQ9NVN3 520 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 BTBD7Q9P203 1132 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 SFMBT1Q9UHJ3 866 aa4.96□□□□□ -1.62
HMGB3P12-201ENST00000438745 ZBTB48P10074 688 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 KRT15P19012 456 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 GLRBP48167 497 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 DNM2P50570 870 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 EPHB4P54760 987 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 PPP2CBP62714 309 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 PPP2CAP67775 309 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 STILQ15468 1287 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 CCDC144BQ3MJ40 725 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 SPATS1Q496A3 300 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 OTOP1Q7RTM1 612 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 PRRT2Q7Z6L0 340 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 KBTBD2Q8IY47 623 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 SAMD11Q96NU1 681 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 TACO1Q9BSH4 297 aaKnown RBP4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 BARX1Q9HBU1 254 aaPredicted RBP4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 PPP4R1LQ9P1A2 415 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 COQ6Q9Y2Z9 468 aa4.95□□□□□ -1.62
HMGB3P12-201ENST00000438745 K7ESM1 405 aa4.94□□□□□ -1.62
HMGB3P12-201ENST00000438745 LAMTOR5O43504 91 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms