RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 C7orf31Q8N865 590 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 FOXD4L4Q8WXT5 416 aaPredicted RBP18.21■□□□□ 0.51
SNRPB-202ENST00000438552 RNPEPQ9H4A4 650 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 PRDM5Q9NQX1 630 aaPredicted RBP18.21■□□□□ 0.51
SNRPB-202ENST00000438552 ZNF302Q9NR11 478 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 PDLIM7Q9NR12 457 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.21■□□□□ 0.51
SNRPB-202ENST00000438552 TRMT13Q9NUP7 481 aaKnown RBP18.21■□□□□ 0.51
SNRPB-202ENST00000438552 ERAP1Q9NZ08 941 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 GTF2IRD1Q9UHL9 959 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 PCDHA10Q9Y5I2 948 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 ARID2Q68CP9 1835 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
SNRPB-202ENST00000438552 DCDC2CA8MYV0 355 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 TLR3O15455 904 aaKnown RBP18.2■□□□□ 0.5
SNRPB-202ENST00000438552 CD4P01730 458 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 CLTBP09497 229 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 SYN1P17600 705 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 SFNP31947 248 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 STAT5BP51692 787 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 FAAP100Q0VG06 881 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 HIC1Q14526 733 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 PDXDC2PQ6P474 469 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 FAM173BQ6P4H8 233 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 SESTD1Q86VW0 696 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 AFAP1L1Q8TED9 768 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 TOX2Q96NM4 488 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 SEZ6LQ9BYH1 1024 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-202ENST00000438552 GABBR1Q9UBS5 961 aa18.2■□□□□ 0.5
SNRPB-202ENST00000438552 ZMYND8Q9ULU4 1186 aaPredicted RBP18.2■□□□□ 0.5
SNRPB-202ENST00000438552 PTPN11Q06124 597 aaPredicted RBP18.19■□□□□ 0.5
SNRPB-202ENST00000438552 PTGDRQ13258 359 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 PLCB4Q15147 1175 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 PLPPR4Q7Z2D5 763 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 SH3RF1Q7Z6J0 888 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 C4orf32Q8N8J7 132 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 RDM1Q8NG50 284 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 PCDHA12Q9UN75 941 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 TRPC6Q9Y210 931 aa18.19■□□□□ 0.5
SNRPB-202ENST00000438552 POTEMA6NI47 508 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
SNRPB-202ENST00000438552 ATP4AP20648 1035 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
SNRPB-202ENST00000438552 PRKCEQ02156 737 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 BANK1Q8NDB2 785 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 CTAGE1Q96RT6 745 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 FTOQ9C0B1 505 aaKnown RBP eCLIP18.18■□□□□ 0.52e-7■■□□□ 13.1
SNRPB-202ENST00000438552 SETD4Q9NVD3 440 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
SNRPB-202ENST00000438552 C17orf102A2RUQ5 167 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 TRIM43BA6NCK2 446 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 ZNF862O60290 1169 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 CYP2C9P11712 490 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 HOXC8P31273 242 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 SLC26A2P50443 739 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 PPFIA1Q13136 1202 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 PTGISQ16647 500 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 TRMT1LQ7Z2T5 733 aaKnown RBP18.17■□□□□ 0.5
SNRPB-202ENST00000438552 CKAP2LQ8IYA6 745 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 LMBR1Q8WVP7 490 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 TRIM43Q96BQ3 446 aaPredicted RBP18.17■□□□□ 0.5
SNRPB-202ENST00000438552 TMEM39AQ9NV64 488 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 TBX21Q9UL17 535 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 NOD1Q9Y239 953 aa18.17■□□□□ 0.5
SNRPB-202ENST00000438552 MAFBQ9Y5Q3 323 aaPredicted RBP18.17■□□□□ 0.5
SNRPB-202ENST00000438552 POTEB3A0JP26 581 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 H0YGN5 161 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 F13A1P00488 732 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 TECP42680 631 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 IGBP1P78318 339 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 ATP2C1P98194 919 aaPredicted RBP18.16■□□□□ 0.5
SNRPB-202ENST00000438552 GRIK4Q16099 956 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 POTEBQ6S5H4 581 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 ATP8B4Q8TF62 1192 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 TRAPPC12Q8WVT3 735 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 ATP6V0A1Q93050 837 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 ZSCAN16Q9H4T2 348 aaPredicted RBP18.16■□□□□ 0.5
SNRPB-202ENST00000438552 SIP14410 1827 aa18.16■□□□□ 0.5
SNRPB-202ENST00000438552 CEP290O15078 2479 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 LAD1O00515 517 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 OATP04181 439 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 INSRRP14616 1297 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 ANP32AP39687 249 aaKnown RBP18.15■□□□□ 0.5
SNRPB-202ENST00000438552 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 EPHA7Q15375 998 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 SF3A1Q15459 793 aaKnown RBP18.15■□□□□ 0.5
SNRPB-202ENST00000438552 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 DHX38Q92620 1227 aaKnown RBP18.15■□□□□ 0.5
SNRPB-202ENST00000438552 ZBTB10Q96DT7 871 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 DYDC2Q96IM9 177 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 PPP1R12CQ9BZL4 782 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 RGL1Q9NZL6 768 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 WRAP73Q9P2S5 460 aaPredicted RBP18.15■□□□□ 0.5
SNRPB-202ENST00000438552 PRKAG2Q9UGJ0 569 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 CLIC4Q9Y696 253 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 UMODL1Q5DID0 1318 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 SCN5AQ14524 2016 aa18.15■□□□□ 0.5
SNRPB-202ENST00000438552 KIAA0355O15063 1070 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms