RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 MAGEB6P1A0A0J9YX57 407 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 TREHO43280 583 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 UBTFL1P0CB47 393 aaPredicted RBP13.28□□□□□ -0.28
RTN4-211ENST00000438462 EDNRBP24530 442 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 SNAP25P60880 206 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 SF3A2Q15428 464 aaKnown RBP13.28□□□□□ -0.28
RTN4-211ENST00000438462 CCDC62Q6P9F0 684 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 TMC5Q6UXY8 1006 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 NPAS4Q8IUM7 802 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 WWC1Q8IX03 1113 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 C12orf50Q8NA57 414 aaPredicted RBP13.28□□□□□ -0.28
RTN4-211ENST00000438462 FAM126AQ9BYI3 521 aaPredicted RBP13.28□□□□□ -0.28
RTN4-211ENST00000438462 NGRNQ9NPE2 291 aaKnown RBP13.28□□□□□ -0.28
RTN4-211ENST00000438462 DZANK1Q9NVP4 752 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 HCSTQ9UBK5 93 aa13.28□□□□□ -0.28
RTN4-211ENST00000438462 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 N4BP1O75113 896 aaKnown RBP13.27□□□□□ -0.29
RTN4-211ENST00000438462 CLASP2O75122 1294 aaKnown RBP13.27□□□□□ -0.29
RTN4-211ENST00000438462 STAT2P52630 851 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 UBXN2BQ14CS0 331 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 PTPN14Q15678 1187 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 C16orf86Q6ZW13 317 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 TMEFF1Q8IYR6 380 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 COLGALT1Q8NBJ5 622 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 MRPS27Q92552 414 aaKnown RBP13.27□□□□□ -0.29
RTN4-211ENST00000438462 NYAP2Q9P242 653 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 LZTS1Q9Y250 596 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
RTN4-211ENST00000438462 FRMPD2Q68DX3 1309 aaPredicted RBP13.27□□□□□ -0.29
RTN4-211ENST00000438462 KIAA1217Q5T5P2 1943 aa13.27□□□□□ -0.29
RTN4-211ENST00000438462 KANSL1LA0AUZ9 987 aa13.26□□□□□ -0.29
RTN4-211ENST00000438462 TMEM232C9JQI7 657 aa13.26□□□□□ -0.29
RTN4-211ENST00000438462 NFIBO00712 420 aa13.26□□□□□ -0.29
RTN4-211ENST00000438462 IKQ13123 557 aaPredicted RBP13.26□□□□□ -0.29
RTN4-211ENST00000438462 FAM26DQ5JW98 314 aa13.26□□□□□ -0.29
RTN4-211ENST00000438462 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
RTN4-211ENST00000438462 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
RTN4-211ENST00000438462 CCPG1Q9ULG6 757 aa13.26□□□□□ -0.29
RTN4-211ENST00000438462 KALRNO60229 2985 aa13.26□□□□□ -0.29
RTN4-211ENST00000438462 SEC24BO95487 1268 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 CALML3P27482 149 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 HOXC8P31273 242 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 MAGEA9P43362 315 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 TROAPQ12815 778 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 SIM2Q14190 667 aaPredicted RBP13.25□□□□□ -0.29
RTN4-211ENST00000438462 LPIN1Q14693 890 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 KIAA1211LQ6NV74 962 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 ZNF605Q86T29 641 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 SHDQ96IW2 340 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 ZNF462Q96JM2 2506 aa13.25□□□□□ -0.29
RTN4-211ENST00000438462 MAP3K13O43283 966 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 CHRNA1P02708 482 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 BMP3P12645 472 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 TDGF1P13385 188 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 SEPT14Q6ZU15 432 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 TMC7Q7Z402 723 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 LRIG1Q96JA1 1093 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 DBNDD2Q9BQY9 259 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 SLC2A4RGQ9NR83 387 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
RTN4-211ENST00000438462 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
RTN4-211ENST00000438462 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 C2orf71A6NGG8 1288 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 FAM170BA6NMN3 283 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 SMIM10L2AP0DMW4 78 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 SMIM10L2BP0DMW5 78 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 EPCAMP16422 314 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 IBSPP21815 317 aaPredicted RBP13.23□□□□□ -0.29
RTN4-211ENST00000438462 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
RTN4-211ENST00000438462 CA8P35219 290 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 SRSF1Q07955 248 aaKnown RBP eCLIP13.23□□□□□ -0.296e-8■■□□□ 13.7
RTN4-211ENST00000438462 SMC1AQ14683 1233 aaKnown RBP13.23□□□□□ -0.29
RTN4-211ENST00000438462 LETM2Q2VYF4 491 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 GPR149Q86SP6 731 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 LCORLQ8N3X6 602 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
RTN4-211ENST00000438462 DDX23Q9BUQ8 820 aaKnown RBP13.23□□□□□ -0.29
RTN4-211ENST00000438462 J3QKU1 62 aa13.22□□□□□ -0.29
RTN4-211ENST00000438462 HYAL3O43820 417 aaPredicted RBP13.22□□□□□ -0.29
RTN4-211ENST00000438462 SNW1Q13573 536 aaKnown RBP13.22□□□□□ -0.29
RTN4-211ENST00000438462 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
RTN4-211ENST00000438462 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
RTN4-211ENST00000438462 EMID1Q96A84 441 aaPredicted RBP13.22□□□□□ -0.29
RTN4-211ENST00000438462 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
RTN4-211ENST00000438462 ANTXR1Q9H6X2 564 aa13.22□□□□□ -0.29
RTN4-211ENST00000438462 KLK13Q9UKR3 277 aa13.22□□□□□ -0.29
RTN4-211ENST00000438462 MSRB2Q9Y3D2 182 aa13.22□□□□□ -0.29
RTN4-211ENST00000438462 ANKRD17O75179 2603 aaKnown RBP13.22□□□□□ -0.29
RTN4-211ENST00000438462 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
RTN4-211ENST00000438462 NRCAMQ92823 1304 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms