RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 SMAP1Q8IYB5 467 aaPredicted RBP20.18■□□□□ 0.82
NCSTN-208ENST00000438008 SLC5A5Q92911 643 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
NCSTN-208ENST00000438008 MTIF3Q9H2K0 278 aaKnown RBP20.18■□□□□ 0.82
NCSTN-208ENST00000438008 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
NCSTN-208ENST00000438008 TDP2O95551 362 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 MMP1P03956 469 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 DEFB128Q7Z7B8 93 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 NEK8Q86SG6 692 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 TNFRSF25Q93038 417 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 UIMC1Q96RL1 719 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 GTF3C3Q9Y5Q9 886 aa20.17■□□□□ 0.82
NCSTN-208ENST00000438008 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.16■□□□□ 0.82
NCSTN-208ENST00000438008 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.16■□□□□ 0.82
NCSTN-208ENST00000438008 MBLAC1A4D2B0 266 aaPredicted RBP20.16■□□□□ 0.82
NCSTN-208ENST00000438008 RRN3P2A6NIE6 340 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 CXCL10P02778 98 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 HMGN5P82970 282 aaKnown RBP20.16■□□□□ 0.82
NCSTN-208ENST00000438008 TRIM29Q14134 588 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 PLCB4Q15147 1175 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 GRIK4Q16099 956 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 ZNF618Q5T7W0 954 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 FAM160B1Q5W0V3 765 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 KRT40Q6A162 431 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 PPP4R3AQ6IN85 833 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 PIK3AP1Q6ZUJ8 805 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 OTOP2Q7RTS6 562 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 RPAINQ86UA6 219 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 CCDC60Q8IWA6 550 aaPredicted RBP20.16■□□□□ 0.82
NCSTN-208ENST00000438008 NAP1L4Q99733 375 aaKnown RBP20.16■□□□□ 0.82
NCSTN-208ENST00000438008 TCEAL9Q9UHQ7 104 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 PCDHA10Q9Y5I2 948 aa20.16■□□□□ 0.82
NCSTN-208ENST00000438008 BACH1O14867 736 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 PSMD10O75832 226 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 INSRRP14616 1297 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 GCFC2P16383 781 aaKnown RBP20.15■□□□□ 0.82
NCSTN-208ENST00000438008 THPOP40225 353 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 NR5A1Q13285 461 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 LETM2Q2VYF4 491 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 EARS2Q5JPH6 523 aaKnown RBP20.15■□□□□ 0.82
NCSTN-208ENST00000438008 MARCH8Q5T0T0 291 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 LRCH2Q5VUJ6 765 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 FAM109BQ6ICB4 259 aaPredicted RBP20.15■□□□□ 0.82
NCSTN-208ENST00000438008 SWSAP1Q6NVH7 229 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 TAF2Q6P1X5 1199 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 ETNPPLQ8TBG4 499 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 BACH2Q9BYV9 841 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 ZNF302Q9NR11 478 aa20.15■□□□□ 0.82
NCSTN-208ENST00000438008 CXXC1Q9P0U4 656 aaPredicted RBP20.15■□□□□ 0.82
NCSTN-208ENST00000438008 DDX25Q9UHL0 483 aaKnown RBP20.15■□□□□ 0.82
NCSTN-208ENST00000438008 MAFBQ9Y5Q3 323 aaPredicted RBP20.15■□□□□ 0.82
NCSTN-208ENST00000438008 TANC1Q9C0D5 1861 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 POTEB3A0JP26 581 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 WDR64B1ANS9 1081 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 RSPH10B2B2RC85 870 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 GAS7O60861 476 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 NBNO60934 754 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 PSAPP07602 524 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 RSPH10BP0C881 870 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 ACTN1P12814 892 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 POTEBQ6S5H4 581 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 B3GNT9Q6UX72 402 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 DIS3L2Q8IYB7 885 aaKnown RBP20.14■□□□□ 0.81
NCSTN-208ENST00000438008 ATP8B4Q8TF62 1192 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 TEKT3Q9BXF9 490 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 FTOQ9C0B1 505 aaKnown RBP eCLIP20.14■□□□□ 0.81
NCSTN-208ENST00000438008 TUBE1Q9UJT0 475 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 TRPC6Q9Y210 931 aa20.14■□□□□ 0.81
NCSTN-208ENST00000438008 BTBD18B2RXH4 712 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 SLC37A4O43826 429 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 HBP1O60381 514 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 SFNP31947 248 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 MCM2P49736 904 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 MBTPS1Q14703 1052 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 FAM26DQ5JW98 314 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 PDXDC2PQ6P474 469 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 RDM1Q8NG50 284 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 DISC1Q9NRI5 854 aa20.13■□□□□ 0.81
NCSTN-208ENST00000438008 TBX3O15119 743 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 BAIAP3O94812 1187 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 RPLP2P05387 115 aaKnown RBP20.12■□□□□ 0.81
NCSTN-208ENST00000438008 ATP4AP20648 1035 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 JAK3P52333 1124 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 RUFY4Q6ZNE9 571 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 GJA10Q969M2 543 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 FAM20AQ96MK3 541 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 UNC45AQ9H3U1 944 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 KCNMB3Q9NPA1 279 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 SAMM50Q9Y512 469 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 SLC4A7Q9Y6M7 1214 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 SZT2Q5T011 3432 aa20.12■□□□□ 0.81
NCSTN-208ENST00000438008 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
NCSTN-208ENST00000438008 IGSF9BQ9UPX0 1349 aa20.11■□□□□ 0.81
NCSTN-208ENST00000438008 FAM205CA6NFA0 338 aa20.11■□□□□ 0.81
NCSTN-208ENST00000438008 CCNT1O60563 726 aaKnown RBP20.11■□□□□ 0.81
NCSTN-208ENST00000438008 FOSBP53539 338 aa20.11■□□□□ 0.81
NCSTN-208ENST00000438008 IGBP1P78318 339 aa20.11■□□□□ 0.81
NCSTN-208ENST00000438008 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
NCSTN-208ENST00000438008 CNKSR3Q6P9H4 555 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms