RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TTC25Q96NG3 672 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 UTYO14607 1347 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 MYO3AQ8NEV4 1616 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 CLIC2O15247 247 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 MYL3P08590 195 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PHKA2P46019 1235 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 MUM1Q2TAK8 710 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 SRGAP2CP0DJJ0 459 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 ELF1P32519 619 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PANX2Q96RD6 677 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PCIF1Q9H4Z3 704 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 TXNDC9O14530 226 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 URGCPQ8TCY9 931 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 TBC1D22BQ9NU19 505 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 SUGT1Q9Y2Z0 365 aa17.12■□□□□ 0.33
PTPN13-204ENST00000436978 ZNF500O60304 480 aaPredicted RBP17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PRELPP51888 382 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 EPHB4P54760 987 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 UBE2SQ16763 222 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 RESP18Q5W5W9 173 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PODNQ7Z5L7 613 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 DNAAF3Q8N9W5 541 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 CCNYQ8ND76 341 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PAMP19021 973 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 KLC3Q6P597 504 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 FAM133AQ8N9E0 248 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 NHEJ1Q9H9Q4 299 aaPredicted RBP17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
PTPN13-204ENST00000436978 RIMS1Q86UR5 1692 aaKnown RBP17.11■□□□□ 0.33
PTPN13-204ENST00000436978 MROH7-TTC4A0A0A0MT08 1334 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PRR36Q9H6K5 1346 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 MSH2P43246 934 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 GNGT1P63211 74 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PAGE5Q96GU1 130 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 MXD3Q9BW11 206 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 HOXA13P31271 388 aaPredicted RBP17.11■□□□□ 0.33
PTPN13-204ENST00000436978 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 PPP1R12CQ9BZL4 782 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 CDC23Q9UJX2 597 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 GFPT2O94808 682 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 TTC4O95801 387 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 HOXD10P28358 340 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 SFNP31947 248 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 TCP11X2Q5H9J9 407 aa17.11■□□□□ 0.33
PTPN13-204ENST00000436978 DHX38Q92620 1227 aaKnown RBP17.11■□□□□ 0.33
PTPN13-204ENST00000436978 USP17L5A8MUK1 530 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 STX1BP61266 288 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 NEK9Q8TD19 979 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 USP32Q8NFA0 1604 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 SUN1O94901 812 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 GH2P01242 217 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 MARK3P27448 753 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 NR5A1Q13285 461 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 TOPORSQ9NS56 1045 aaPredicted RBP17.1■□□□□ 0.33
PTPN13-204ENST00000436978 NXF1Q9UBU9 619 aaKnown RBP17.1■□□□□ 0.33
PTPN13-204ENST00000436978 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 PTPROQ16827 1216 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 KRT39Q6A163 491 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
PTPN13-204ENST00000436978 SMYD2Q9NRG4 433 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 LMCD1Q9NZU5 365 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 CCNE1P24864 410 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 PGBD1Q96JS3 809 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 COG7P83436 770 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 SLMAPQ14BN4 828 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 CAPN12Q6ZSI9 719 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
PTPN13-204ENST00000436978 ZBED6P86452 979 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 KYAT1Q16773 422 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 ENOX1Q8TC92 643 aaKnown RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 MINPP1Q9UNW1 487 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 ORC6Q9Y5N6 252 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 C21orf2O43822 256 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 CUL4AQ13619 759 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 TTLL4Q14679 1199 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 DSTYKQ6XUX3 929 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 SMYD4Q8IYR2 804 aaPredicted RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 C7orf31Q8N865 590 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 MTRQ99707 1265 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 FDX1P10109 184 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 RHOT2Q8IXI1 618 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 GBP7Q8N8V2 638 aaPredicted RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 SART1O43290 800 aaKnown RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 EIF2AK2P19525 551 aaKnown RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 LRRC41Q15345 812 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 ZC3H15Q8WU90 426 aaKnown RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 CNOT10Q9H9A5 744 aaKnown RBP17.09■□□□□ 0.33
PTPN13-204ENST00000436978 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
PTPN13-204ENST00000436978 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms