RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 XIRP2A4UGR9 3374 aa10.17□□□□□ -0.78
CTDSPL-205ENST00000436654 DDX39AO00148 427 aaKnown RBP10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 MAFGO15525 162 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 PPFIA3O75145 1194 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 FOSP01100 380 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 ZNF76P36508 570 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 ACTR2P61160 394 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 MGAT3Q09327 533 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 ITGB3BPQ13352 177 aaPredicted RBP10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 LPIN1Q14693 890 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 EPC2Q52LR7 807 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 CEP55Q53EZ4 464 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 JAKMIP3Q5VZ66 844 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 APBB2Q92870 758 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 JAKMIP1Q96N16 626 aaKnown RBP10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 SDF4Q9BRK5 362 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 AZI2Q9H6S1 392 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 AGO4Q9HCK5 861 aaKnown RBP10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 LMCD1Q9NZU5 365 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 CDY2AQ9Y6F7 541 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 GBF1Q92538 1859 aa10.16□□□□□ -0.78
CTDSPL-205ENST00000436654 NFASCO94856 1347 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 MBLAC1A4D2B0 266 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 RRN3P2A6NIE6 340 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 hCG_1984214I3L0E3 225 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 ADAMTS3O15072 1205 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 SREBF1P36956 1147 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 MRPS6P82932 125 aaKnown RBP10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 TMEM62Q0P6H9 643 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 PLCB4Q15147 1175 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 FBXO47Q5MNV8 452 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 Q6ZUG5 572 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 RPAINQ86UA6 219 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 TMEM192Q8IY95 271 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 ZNF713Q8N859 430 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 BRF1Q92994 677 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 SNX14Q9Y5W7 946 aa10.15□□□□□ -0.78
CTDSPL-205ENST00000436654 MYH6P13533 1939 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 MEIS1O00470 390 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 ENPP3O14638 875 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 BACH1O14867 736 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 CCNE2O96020 404 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 SCG2P13521 617 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 CD52P31358 61 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 STAT5BP51692 787 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 AP3B2Q13367 1082 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 GPM6BQ13491 265 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 PFKFB3Q16875 520 aaPredicted RBP10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 BLOC1S2Q6QNY1 142 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 TSHZ1Q6ZSZ6 1077 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 PLA2G4DQ86XP0 818 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 FIBCD1Q8N539 461 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 TET1Q8NFU7 2136 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 PHKBQ93100 1093 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 MRPL38Q96DV4 380 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 SAMD11Q96NU1 681 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 GLT8D2Q9H1C3 349 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 UBE2ZQ9H832 354 aaPredicted RBP10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 AGO3Q9H9G7 860 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 REV3LO60673 3130 aa10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 BAZ2BQ9UIF8 2168 aaKnown RBP10.14□□□□□ -0.79
CTDSPL-205ENST00000436654 TRANK1O15050 2925 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 CCDC196A0A1B0GTZ2 297 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 FAM86B1E9PN63 330 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 H3BNC9 293 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 CSPG5O95196 566 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 FAM86B2P0C5J1 330 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 IBSPP21815 317 aaPredicted RBP10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 KCNA5P22460 613 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 HSPA4P34932 840 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 CTNNB1P35222 781 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 RCAN1P53805 252 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 PTPROQ16827 1216 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 IER5Q5VY09 327 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 PLPPR4Q7Z2D5 763 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 TEX2Q8IWB9 1127 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 LINC01599Q8WXQ3 324 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 KCNB2Q92953 911 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 CCDC136Q96JN2 1154 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 PCDHA2Q9Y5H9 948 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 TRPV2Q9Y5S1 764 aa10.13□□□□□ -0.79
CTDSPL-205ENST00000436654 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 PTPRSQ13332 1948 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 IGLV3-22A0A075B6J6 115 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 M0QZ92 97 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 IPO5O00410 1097 aaKnown RBP10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 ATG7O95352 703 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 RPS6KB1P23443 525 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 BTG3Q14201 252 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 PKN1Q16512 942 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 TMEM266Q2M3C6 531 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 TIGD5Q53EQ6 642 aa10.12□□□□□ -0.79
CTDSPL-205ENST00000436654 TCEAL5Q5H9L2 206 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms