RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 KRIT1O00522 736 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 KIF5BP33176 963 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 SNCBQ16143 134 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 ZNF571Q7Z3V5 609 aaPredicted RBP11.45□□□□□ -0.58
SCAF4-203ENST00000434667 KIF2BQ8N4N8 673 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 LARP4BQ92615 738 aaKnown RBP11.45□□□□□ -0.58
SCAF4-203ENST00000434667 C7orf25Q9BPX7 421 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 SLC12A6Q9UHW9 1150 aa11.45□□□□□ -0.58
SCAF4-203ENST00000434667 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
SCAF4-203ENST00000434667 A0A1W2PQJ5 194 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 EZRP15311 586 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 SMTNP53814 917 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 IFI35P80217 286 aaPredicted RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 NAB2Q15742 525 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 CAVIN4Q5BKX8 364 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 DCAF17Q5H9S7 520 aaPredicted RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 MSL1Q68DK7 614 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 HVCN1Q96D96 273 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 CALML4Q96GE6 196 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 NOC2LQ9Y3T9 749 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 F8W031 263 aaPredicted RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 STAT3P40763 770 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 OTUD6AQ7L8S5 288 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 BRIP1Q9BX63 1249 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 BARHL2Q9NY43 387 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 MINPP1Q9UNW1 487 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 UBR3Q6ZT12 1888 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 MEIS1O00470 390 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 CTNND1O60716 968 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 VIMP08670 466 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 PRLRP16471 622 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 HNRNPH3P31942 346 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 CASP5P51878 434 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 RCAN1P53805 252 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 PPP2R5BQ15173 497 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 NONOQ15233 471 aaKnown RBP eCLIP11.44□□□□□ -0.582e-9■□□□□ 10
SCAF4-203ENST00000434667 MICALCLQ6ZW33 695 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 ZNF572Q7Z3I7 529 aaPredicted RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 CRNKL1Q9BZJ0 848 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 DNAJC17Q9NVM6 304 aaKnown RBP11.44□□□□□ -0.58
SCAF4-203ENST00000434667 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
SCAF4-203ENST00000434667 TRAPPC3O43617 180 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 MYO1EQ12965 1108 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 NEDD9Q14511 834 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 ANKS1AQ92625 1134 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 ELAC2Q9BQ52 826 aaKnown RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 DONSONQ9NYP3 566 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 IRS2Q9Y4H2 1338 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 ANKRD62A6NC57 917 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 EDIL3O43854 480 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 CALCRLQ16602 461 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 NEK8Q86SG6 692 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 LRRC47Q8N1G4 583 aaKnown RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 TRIM33Q9UPN9 1127 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 USP17L5A8MUK1 530 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 GCKP35557 465 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 HSPA9P38646 679 aaKnown RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 CRKLP46109 303 aaKnown RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 CDK17Q00537 523 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 PREPLQ4J6C6 727 aaPredicted RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 NAIF1Q69YI7 327 aaPredicted RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 CACNA2D3Q8IZS8 1091 aa11.43□□□□□ -0.58
SCAF4-203ENST00000434667 ARPP21Q9UBL0 812 aaPredicted RBP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCAF4-203ENST00000434667 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 HMGB1P1B2RPK0 211 aaPredicted RBP11.42□□□□□ -0.58
SCAF4-203ENST00000434667 PJA2O43164 708 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 LCA5LO95447 670 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 SLC16A2P36021 539 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 PPP2R2AP63151 447 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 SLC18A3Q16572 532 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 DZIP1Q86YF9 867 aaKnown RBP11.42□□□□□ -0.58
SCAF4-203ENST00000434667 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 VEZTQ9HBM0 779 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 ERVK-5Q9HDB9 667 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 SNX24Q9Y343 169 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 CLIC2O15247 247 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 CREB1P16220 341 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 HSPA2P54652 639 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 KCNA1Q09470 495 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 COASYQ13057 564 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 FIGNQ5HY92 759 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 CCDC84Q86UT8 332 aaPredicted RBP11.42□□□□□ -0.58
SCAF4-203ENST00000434667 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
SCAF4-203ENST00000434667 MIEF2Q96C03 454 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 TMOD4Q9NZQ9 345 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 COL4A3BPQ9Y5P4 624 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 TMEM110-MUSTN1A8MSY1 372 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 SERPING1P05155 500 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 CHN1P15882 459 aa11.42□□□□□ -0.58
SCAF4-203ENST00000434667 PLTPP55058 493 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms