RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
LINC01090-202ENST00000434418 PHIPQ8WWQ0 1821 aa12.13□□□□□ -0.47
LINC01090-202ENST00000434418 PTPRFP10586 1907 aa12.13□□□□□ -0.47
LINC01090-202ENST00000434418 ADGRA2Q96PE1 1338 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 MYO5AQ9Y4I1 1855 aaKnown RBP12.12□□□□□ -0.47
LINC01090-202ENST00000434418 TRIM75PA6NK02 468 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 SURF6O75683 361 aaKnown RBP12.12□□□□□ -0.47
LINC01090-202ENST00000434418 PF4P02776 101 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 ITGB7P26010 798 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 GSTO1P78417 241 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 ATP8B2P98198 1209 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 FAM160A1Q05DH4 1040 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 TTLL4Q14679 1199 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 ARHGEF6Q15052 776 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 PPM1JQ5JR12 505 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 TTC39AQ5SRH9 613 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 GADL1Q6ZQY3 521 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 C12orf40Q86WS4 652 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 SSH3Q8TE77 659 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
LINC01090-202ENST00000434418 MIR1-1HGQ9H1L0 117 aa12.12□□□□□ -0.47
LINC01090-202ENST00000434418 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 ZNF76P36508 570 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 PSMC4P43686 418 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 CAMK2GQ13555 558 aaPredicted RBP12.11□□□□□ -0.47
LINC01090-202ENST00000434418 BNC2Q6ZN30 1099 aaPredicted RBP12.11□□□□□ -0.47
LINC01090-202ENST00000434418 HS2ST1Q7LGA3 356 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 TEX11Q8IYF3 940 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 PARK7Q99497 189 aaKnown RBP12.11□□□□□ -0.47
LINC01090-202ENST00000434418 ACSS3Q9H6R3 686 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.11□□□□□ -0.47
LINC01090-202ENST00000434418 STOML1Q9UBI4 398 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 AFG3L2Q9Y4W6 797 aa12.11□□□□□ -0.47
LINC01090-202ENST00000434418 CDK5RAP2Q96SN8 1893 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 SIPA1L1O43166 1804 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 A0A0G2JLL6 359 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-202ENST00000434418 CXCL11O14625 94 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 CTNND1O60716 968 aaKnown RBP12.1□□□□□ -0.47
LINC01090-202ENST00000434418 LDHCP07864 332 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 NFICP08651 508 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 WIPI1Q5MNZ9 446 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-202ENST00000434418 SCARA3Q6AZY7 606 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 PRRT2Q7Z6L0 340 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-202ENST00000434418 ADGRA1Q86SQ6 560 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 PANK1Q8TE04 598 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 OSBPL5Q9H0X9 879 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-202ENST00000434418 ATXN3LQ9H3M9 355 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 SEMA6CQ9H3T2 930 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 BRCA2P51587 3418 aa12.1□□□□□ -0.47
LINC01090-202ENST00000434418 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
LINC01090-202ENST00000434418 MGAMO43451 1857 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 K7ELQ4 463 aaPredicted RBP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 SLC4A8Q2Y0W8 1093 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 CCDC158Q5M9N0 1113 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 NBPF11Q86T75 865 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 CLEC10AQ8IUN9 316 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 NOL10Q9BSC4 688 aaKnown RBP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 CCDC8Q9H0W5 538 aaPredicted RBP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 PIDD1Q9HB75 910 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 PIH1D3Q9NQM4 214 aaKnown RBP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 AATFQ9NY61 560 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 DBNLQ9UJU6 430 aaKnown RBP12.09□□□□□ -0.47
LINC01090-202ENST00000434418 FOCADQ5VW36 1801 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 ZBED9Q6R2W3 1325 aa12.09□□□□□ -0.47
LINC01090-202ENST00000434418 COL2A1P02458 1487 aaPredicted RBP12.08□□□□□ -0.47
LINC01090-202ENST00000434418 MKI67P46013 3256 aaKnown RBP12.08□□□□□ -0.48
LINC01090-202ENST00000434418 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.08□□□□□ -0.48
LINC01090-202ENST00000434418 FAM95CA0A1B0GW59 222 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 DYNC1LI2O43237 492 aaPredicted RBP12.08□□□□□ -0.48
LINC01090-202ENST00000434418 NTF4P34130 210 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 ERVK-24P63145 666 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 LMNB2Q03252 620 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 RRP1BQ14684 758 aaKnown RBP12.08□□□□□ -0.48
LINC01090-202ENST00000434418 CEP85Q6P2H3 762 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 FASTKD5Q7L8L6 764 aaKnown RBP12.08□□□□□ -0.48
LINC01090-202ENST00000434418 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 EZH1Q92800 747 aaPredicted RBP12.08□□□□□ -0.48
LINC01090-202ENST00000434418 ELMO3Q96BJ8 720 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 FAM83CQ9BQN1 747 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 SRRDQ9UH36 339 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 EXOC6BQ9Y2D4 811 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 MYPNQ86TC9 1320 aa12.08□□□□□ -0.48
LINC01090-202ENST00000434418 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 PRAMEF27A3QJZ7 478 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 RNGTTO60942 597 aaKnown RBP12.07□□□□□ -0.48
LINC01090-202ENST00000434418 GARTP22102 1010 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 PRKCZQ05513 592 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 PWP1Q13610 501 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 NFKBIBQ15653 356 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 PRSS36Q5K4E3 855 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 TREML2Q5T2D2 321 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 UBE3DQ7Z6J8 389 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 RAET1EQ8TD07 263 aa12.07□□□□□ -0.48
LINC01090-202ENST00000434418 SMCR8Q8TEV9 937 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms