RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 HOMER1Q86YM7 354 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 VSTM4Q8IW00 320 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
SNHG20-202ENST00000434411 SYMPKQ92797 1274 aaKnown RBP13.41□□□□□ -0.26
SNHG20-202ENST00000434411 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
SNHG20-202ENST00000434411 DHX58Q96C10 678 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 CEP95Q96GE4 821 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 KLHL42Q9P2K6 505 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 TMEM98Q9Y2Y6 226 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 N6AMT1Q9Y5N5 214 aa13.41□□□□□ -0.26
SNHG20-202ENST00000434411 TMEM232C9JQI7 657 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 CPP00450 1065 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 GH2P01242 217 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 BMP6P22004 513 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
SNHG20-202ENST00000434411 NAPAP54920 295 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 PRPF4BQ13523 1007 aaKnown RBP13.4□□□□□ -0.26
SNHG20-202ENST00000434411 MTMR2Q13614 643 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 PREPLQ4J6C6 727 aaPredicted RBP13.4□□□□□ -0.26
SNHG20-202ENST00000434411 EARS2Q5JPH6 523 aaKnown RBP13.4□□□□□ -0.26
SNHG20-202ENST00000434411 TREML2Q5T2D2 321 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 ACBD5Q5T8D3 534 aaPredicted RBP13.4□□□□□ -0.26
SNHG20-202ENST00000434411 KRT25Q7Z3Z0 450 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 ANKRD13BQ86YJ7 626 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 GSDMAQ96QA5 445 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 NACA2Q9H009 215 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 TMEM165Q9HC07 324 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 MAN1B1Q9UKM7 699 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 MYH4Q9Y623 1939 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 STXBP3O00186 592 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 TUBB4AP04350 444 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 BCRP11274 1271 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 PSMC4P43686 418 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 NOVP48745 357 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 JAG1P78504 1218 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 ZBED6P86452 979 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 PTPN21Q16825 1174 aa13.4□□□□□ -0.26
SNHG20-202ENST00000434411 MYL1P05976 194 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 SHMT1P34896 483 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 SARSP49591 514 aaKnown RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 SOX10P56693 466 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 GABPAQ06546 454 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 GOLGA8FQ08AF8 430 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 GOLGA8DPQ0D2H9 430 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 ORC2Q13416 577 aaPredicted RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 SPATA20Q8TB22 786 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 BAG1Q99933 345 aaPredicted RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 SPOCK3Q9BQ16 436 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 ARHGAP39Q9C0H5 1083 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 L2HGDHQ9H9P8 463 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 TTLL1O95922 423 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 GCLCP48506 637 aaPredicted RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 FCGRTP55899 365 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 CAP1Q01518 475 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 MORC3Q14149 939 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 USP17L2Q6R6M4 530 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 EPSTI1Q96J88 318 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 TRIM6Q9C030 488 aaPredicted RBP13.39□□□□□ -0.27
SNHG20-202ENST00000434411 RMND1Q9NWS8 449 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 MTMR4Q9NYA4 1195 aa13.39□□□□□ -0.27
SNHG20-202ENST00000434411 ESYT2A0FGR8 921 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 CYTH3O43739 400 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 PRPHP41219 470 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 GJA8P48165 433 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 USP14P54578 494 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNHG20-202ENST00000434411 SHROOM1Q2M3G4 852 aaPredicted RBP13.38□□□□□ -0.27
SNHG20-202ENST00000434411 SLC9C1Q4G0N8 1177 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 DTHD1Q6ZMT9 781 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 GRAMD1CQ8IYS0 662 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 ENOX1Q8TC92 643 aaKnown RBP13.38□□□□□ -0.27
SNHG20-202ENST00000434411 JADE2Q9NQC1 790 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 PTCH2Q9Y6C5 1203 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 COMMD10Q9Y6G5 202 aa13.38□□□□□ -0.27
SNHG20-202ENST00000434411 M0R2N6 131 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 HOXA7P31268 230 aaPredicted RBP13.37□□□□□ -0.27
SNHG20-202ENST00000434411 ETF1P62495 437 aaKnown RBP13.37□□□□□ -0.27
SNHG20-202ENST00000434411 FXNQ16595 210 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 RASSF8Q8NHQ8 419 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 PPM1EQ8WY54 764 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 TRIM47Q96LD4 638 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 ASCC2Q9H1I8 757 aaPredicted RBP13.37□□□□□ -0.27
SNHG20-202ENST00000434411 INTS13Q9NVM9 706 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 SPATA7Q9P0W8 599 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 SRRDQ9UH36 339 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 DNAI1Q9UI46 699 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 PCDHA6Q9UN73 950 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 PCDHA8Q9Y5H6 950 aa13.37□□□□□ -0.27
SNHG20-202ENST00000434411 GREB1LQ9C091 1923 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms