RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 SLC5A5Q92911 643 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
RFTN1-203ENST00000432519 UNC45AQ9H3U1 944 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 MLXIPQ9HAP2 919 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 PIM2Q9P1W9 311 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 MYO1AQ9UBC5 1043 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 MYO6Q9UM54 1294 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.19■□□□□ 0.18
RFTN1-203ENST00000432519 CAPN6Q9Y6Q1 641 aa16.19■□□□□ 0.18
RFTN1-203ENST00000432519 CLIC2O15247 247 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 EYA4O95677 639 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 ACTN1P12814 892 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 NMT1P30419 496 aaKnown RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 CDK17Q00537 523 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 GFPT1Q06210 699 aaPredicted RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 PDXDC1Q6P996 788 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 FOXR2Q6PJQ5 311 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 ZC3H3Q8IXZ2 948 aaKnown RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 NEK11Q8NG66 645 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 RABGGTAQ92696 567 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 CEP63Q96MT8 703 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 LSM14BQ9BX40 385 aaKnown RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 ZNF185O15231 689 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 AKAP3O75969 853 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 ASNSP08243 561 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 BAG6P46379 1132 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 PRELPP51888 382 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 POLR2FP61218 127 aaKnown RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 KNOP1Q1ED39 458 aaKnown RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 TRAPPC11Q7Z392 1133 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 PURBQ96QR8 312 aaKnown RBP16.18■□□□□ 0.18
RFTN1-203ENST00000432519 ASTN1O14525 1302 aa16.18■□□□□ 0.18
RFTN1-203ENST00000432519 GAS7O60861 476 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 RHOXF2BP0C7M4 288 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 MARSP56192 900 aaKnown RBP16.17■□□□□ 0.18
RFTN1-203ENST00000432519 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
RFTN1-203ENST00000432519 PRAMEF18Q5VWM3 479 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 CACNA2D4Q7Z3S7 1137 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 RHOXF2Q9BQY4 288 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 MRPL11Q9Y3B7 192 aaKnown RBP16.17■□□□□ 0.18
RFTN1-203ENST00000432519 PCNTO95613 3336 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 GCNT3O95395 438 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 VAV2P52735 878 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 ARID5AQ03989 594 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 PPP2R5CQ13362 524 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 COG2Q14746 738 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 ENOX2Q16206 610 aaKnown RBP16.17■□□□□ 0.18
RFTN1-203ENST00000432519 MUM1L1Q5H9M0 696 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 CC2D1AQ6P1N0 951 aaPredicted RBP16.17■□□□□ 0.18
RFTN1-203ENST00000432519 C1orf186Q6ZWK4 172 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 BANK1Q8NDB2 785 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 CAPZA3Q96KX2 299 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 SH2D3AQ9BRG2 576 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
RFTN1-203ENST00000432519 PCDHA13Q9Y5I0 950 aa16.17■□□□□ 0.18
RFTN1-203ENST00000432519 ATAD5Q96QE3 1844 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 TGFB1I1O43294 461 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 KRT86O43790 486 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 SLC9A1P19634 815 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 DPY19L2P1Q6NXN4 242 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 TMCO3Q6UWJ1 677 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 HOOK2Q96ED9 719 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 DRC1Q96MC2 740 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 MMS19Q96T76 1030 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 WDR11Q9BZH6 1224 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 RAVER2Q9HCJ3 691 aaKnown RBP16.16■□□□□ 0.18
RFTN1-203ENST00000432519 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
RFTN1-203ENST00000432519 TRAF3IP3Q9Y228 551 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 ZMYM2Q9UBW7 1377 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 SLC26A4O43511 780 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 TBC1D8O95759 1140 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 PLA2G4AP47712 749 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 EDRF1Q3B7T1 1238 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 TBC1D10BQ4KMP7 808 aaPredicted RBP16.16■□□□□ 0.18
RFTN1-203ENST00000432519 FAM160B2Q86V87 743 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 FIZ1Q96SL8 496 aa16.16■□□□□ 0.18
RFTN1-203ENST00000432519 IPO5O00410 1097 aaKnown RBP16.15■□□□□ 0.18
RFTN1-203ENST00000432519 CETN3O15182 167 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 AKR1B10O60218 316 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 B3GNT9Q6UX72 402 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 ZNF662Q6ZS27 426 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 DNAAF5Q86Y56 855 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 CEP112Q8N8E3 955 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 SUGCTQ9HAC7 445 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 PDE2AO00408 941 aaPredicted RBP16.15■□□□□ 0.18
RFTN1-203ENST00000432519 PLA2G6O60733 806 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 MOCS3O95396 460 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 ICAM1P05362 532 aa16.15■□□□□ 0.18
RFTN1-203ENST00000432519 SF3B2Q13435 895 aaKnown RBP16.15■□□□□ 0.18
RFTN1-203ENST00000432519 TRMT1LQ7Z2T5 733 aaKnown RBP16.15■□□□□ 0.18
RFTN1-203ENST00000432519 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms