RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 GABBR1Q9UBS5 961 aa20.74■□□□□ 0.91
RFTN1-202ENST00000431547 CEP131Q9UPN4 1083 aa20.74■□□□□ 0.91
RFTN1-202ENST00000431547 ATP11BQ9Y2G3 1177 aa20.74■□□□□ 0.91
RFTN1-202ENST00000431547 DCDC2CA8MYV0 355 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 DDIT3P35638 169 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 FXR2P51116 673 aaKnown RBP eCLIP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 SF3A1Q15459 793 aaKnown RBP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 FAM47CQ5HY64 1035 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 FOXD4L5Q5VV16 416 aaPredicted RBP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 ARL6IP4Q66PJ3 421 aaKnown RBP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 PDXDC2PQ6P474 469 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 FAM126BQ8IXS8 530 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 FOXD4L4Q8WXT5 416 aaPredicted RBP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 TNPO1Q92973 898 aaKnown RBP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 HDAC6Q9UBN7 1215 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 ZDHHC9Q9Y397 364 aa20.73■□□□□ 0.91
RFTN1-202ENST00000431547 RBM19Q9Y4C8 960 aaKnown RBP20.73■□□□□ 0.91
RFTN1-202ENST00000431547 EVI5O60447 810 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 PQBP1O60828 265 aaKnown RBP20.72■□□□□ 0.91
RFTN1-202ENST00000431547 P4HBP07237 508 aaKnown RBP20.72■□□□□ 0.91
RFTN1-202ENST00000431547 SMIM10L2AP0DMW4 78 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 SMIM10L2BP0DMW5 78 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 MARK3P27448 753 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 TECP42680 631 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 MLLT1Q03111 559 aaPredicted RBP20.72■□□□□ 0.91
RFTN1-202ENST00000431547 PDIA5Q14554 519 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 PLCB4Q15147 1175 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 TMEM266Q2M3C6 531 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 NCAPH2Q6IBW4 605 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 PPP1R13LQ8WUF5 828 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 DPF3Q92784 378 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 GTF2IRD1Q9UHL9 959 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 CLIC4Q9Y696 253 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 IGSF9BQ9UPX0 1349 aa20.72■□□□□ 0.91
RFTN1-202ENST00000431547 POTEB3A0JP26 581 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 TLR3O15455 904 aaKnown RBP20.71■□□□□ 0.91
RFTN1-202ENST00000431547 CD4P01730 458 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 ATP4AP20648 1035 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 HOXC8P31273 242 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 IL17AQ16552 155 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 POTEBQ6S5H4 581 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 DTHD1Q6ZMT9 781 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 ATP8B4Q8TF62 1192 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 ATP6V0A1Q93050 837 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 ZNF396Q96N95 335 aaPredicted RBP20.71■□□□□ 0.91
RFTN1-202ENST00000431547 HSD17B14Q9BPX1 270 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 NRCAMQ92823 1304 aa20.71■□□□□ 0.91
RFTN1-202ENST00000431547 ZNF862O60290 1169 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 DKC1O60832 514 aaKnown RBP eCLIP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 GNAT1P11488 350 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 QARSP47897 775 aaKnown RBP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 PSMC5P62195 406 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 FAAP100Q0VG06 881 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 PTPAQ15257 358 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 UGCGQ16739 394 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 ATL3Q6DD88 541 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 GDF6Q6KF10 455 aaPredicted RBP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 IGSF22Q8N9C0 903 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 BBXQ8WY36 941 aaPredicted RBP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 USP28Q96RU2 1077 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 EIF2AK1Q9BQI3 630 aaKnown RBP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 RAB34Q9BZG1 259 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 FTOQ9C0B1 505 aaKnown RBP eCLIP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 TRPV6Q9H1D0 765 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 MORC2Q9Y6X9 1032 aaPredicted RBP20.7■□□□□ 0.9
RFTN1-202ENST00000431547 DOCK5Q9H7D0 1870 aa20.7■□□□□ 0.9
RFTN1-202ENST00000431547 SCN10AQ9Y5Y9 1956 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 C17orf102A2RUQ5 167 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 POTEMA6NI47 508 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 RRN3P2A6NIE6 340 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 HBP1O60381 514 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 B4GALT4O60513 344 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 SLITRK3O94933 977 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 INSRRP14616 1297 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 NUCB2P80303 420 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 CKAP2LQ8IYA6 745 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 BANK1Q8NDB2 785 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 NEK9Q8TD19 979 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 FAM167AQ96KS9 214 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 NRBP2Q9NSY0 501 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 TRMT13Q9NUP7 481 aaKnown RBP20.69■□□□□ 0.9
RFTN1-202ENST00000431547 SETD4Q9NVD3 440 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 RGL1Q9NZL6 768 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 LRWD1Q9UFC0 647 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 TRPC6Q9Y210 931 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 NR2E3Q9Y5X4 410 aa20.69■□□□□ 0.9
RFTN1-202ENST00000431547 CLTBP09497 229 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 NASPP49321 788 aaPredicted RBP20.68■□□□□ 0.9
RFTN1-202ENST00000431547 ADAM17P78536 824 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 PPFIA1Q13136 1202 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 HIC1Q14526 733 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 SLC39A14Q15043 492 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 PTGISQ16647 500 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 C7orf61Q8IZ16 206 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 ERMNQ8TAM6 284 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 DYDC2Q96IM9 177 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 STK24Q9Y6E0 443 aa20.68■□□□□ 0.9
RFTN1-202ENST00000431547 STBD1O95210 358 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 OATP04181 439 aa20.67■□□□□ 0.9
RFTN1-202ENST00000431547 PRKCEQ02156 737 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms