RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 LMBR1Q8WVP7 490 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 SEPT1Q8WYJ6 367 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
TRERNA1-201ENST00000431460 MAFGO15525 162 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 ATP2A2P16615 1042 aaKnown RBP13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 USP11P51784 963 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 FOSBP53539 338 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 ACTR2P61160 394 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 PPFIA1Q13136 1202 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 TRIM71Q2Q1W2 868 aaKnown RBP13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 PRR16Q569H4 304 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 SERINC5Q86VE9 423 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 MYLIPQ8WY64 445 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 TNFRSF25Q93038 417 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 CDX2Q99626 313 aaPredicted RBP13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 NKX2-4Q9H2Z4 354 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 ERAP1Q9NZ08 941 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
TRERNA1-201ENST00000431460 IGLV3-22A0A075B6J6 115 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 CCDC194A0A1B0GVG4 234 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 BTBD18B2RXH4 712 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 MEIS1O00470 390 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 NBNO60934 754 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 GNAT1P11488 350 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 MYOGP15173 224 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 PDCP20941 246 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 CIITAP33076 1130 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 NR5A1Q13285 461 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 LARP1BQ659C4 914 aaKnown RBP13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 NIPA1Q7RTP0 329 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 TBCKQ8TEA7 893 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 ZBTB10Q96DT7 871 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 PCYT2Q99447 389 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 ZNF577Q9BSK1 485 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 SMARCAD1Q9H4L7 1026 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 AZI2Q9H6S1 392 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 TCEAL9Q9UHQ7 104 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 MSRAQ9UJ68 235 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 YBX2Q9Y2T7 364 aaKnown RBP13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 CDH23Q9H251 3354 aa13.48□□□□□ -0.25
TRERNA1-201ENST00000431460 NFASCO94856 1347 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 EMSYQ7Z589 1322 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 RSPH10B2B2RC85 870 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 IPO5O00410 1097 aaKnown RBP13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 BACH1O14867 736 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 EDIL3O43854 480 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 CCNE2O96020 404 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 HSP90AA1P07900 732 aaKnown RBP13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 RSPH10BP0C881 870 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 HOXC8P31273 242 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 KCNJ6P48051 423 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 RBL2Q08999 1139 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 BECN1Q14457 450 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 GPNMBQ14956 572 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 GRIN2CQ14957 1233 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 RAB30Q15771 203 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 GRIK4Q16099 956 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 TCTN1Q2MV58 587 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 PIK3AP1Q6ZUJ8 805 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 TMCO2Q7Z6W1 182 aaPredicted RBP13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 ZNF576Q9H609 170 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 STXBP5LQ9Y2K9 1186 aa13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 TRIP12Q14669 1992 aaPredicted RBP13.47□□□□□ -0.25
TRERNA1-201ENST00000431460 NRCAMQ92823 1304 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 CYP3A7-CYP3A51PA0A087WV96 503 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 H3BQV1 296 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 FOSL2P15408 326 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 CYP3A7P24462 503 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 INF2Q27J81 1249 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 PPP2R2DQ66LE6 453 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 CNKSR3Q6P9H4 555 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 NEK8Q86SG6 692 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 TRAPPC12Q8WVT3 735 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 TUBE1Q9UJT0 475 aa13.46□□□□□ -0.25
TRERNA1-201ENST00000431460 GBF1Q92538 1859 aa13.46□□□□□ -0.26
TRERNA1-201ENST00000431460 CHMP2AO43633 222 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 LGR5O75473 907 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 PDIA4P13667 645 aaKnown RBP13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 INSRRP14616 1297 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 STAT5BP51692 787 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 WDR5P61964 334 aaKnown RBP13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 DEFB103AP81534 67 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 PLCB4Q15147 1175 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 NOSTRINQ8IVI9 506 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 CCDC60Q8IWA6 550 aaPredicted RBP13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 GJA10Q969M2 543 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 MBOAT7Q96N66 472 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms