RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 AFAP1L1Q8TED9 768 aa14.03□□□□□ -0.16
USP40-205ENST00000430158 GLT1D1Q96MS3 346 aa14.03□□□□□ -0.16
USP40-205ENST00000430158 CTAGE1Q96RT6 745 aa14.03□□□□□ -0.16
USP40-205ENST00000430158 TEKT3Q9BXF9 490 aa14.03□□□□□ -0.16
USP40-205ENST00000430158 NOL7Q9UMY1 257 aaKnown RBP14.03□□□□□ -0.16
USP40-205ENST00000430158 EMSYQ7Z589 1322 aa14.03□□□□□ -0.16
USP40-205ENST00000430158 ARVCFO00192 962 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 NOP56O00567 594 aaKnown RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 STBD1O95210 358 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 PSEN2P49810 448 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 PTGDRQ13258 359 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 ITGA7Q13683 1181 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 PTPAQ15257 358 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 SESTD1Q86VW0 696 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 CCDC60Q8IWA6 550 aaPredicted RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 SLFN12Q8IYM2 578 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 RDM1Q8NG50 284 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 RBM19Q9Y4C8 960 aaKnown RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 PCDHA10Q9Y5I2 948 aa14.02□□□□□ -0.17
USP40-205ENST00000430158 MAFBQ9Y5Q3 323 aaPredicted RBP14.02□□□□□ -0.17
USP40-205ENST00000430158 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
USP40-205ENST00000430158 H3BRB1 525 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 ZNF862O60290 1169 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 F13A1P00488 732 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 OR52Z1P0C646 297 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 ADAM17P78536 824 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 MFSD10Q14728 455 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 KIAA0753Q2KHM9 967 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 UTP14CQ5TAP6 766 aaKnown RBP14.01□□□□□ -0.17
USP40-205ENST00000430158 NFRKBQ6P4R8 1299 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 PLPPR4Q7Z2D5 763 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 ANKRD33Q7Z3H0 272 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 PPP1R13LQ8WUF5 828 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 SEZ6LQ9BYH1 1024 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 FTOQ9C0B1 505 aaKnown RBP eCLIP14.01□□□□□ -0.17
USP40-205ENST00000430158 RNPEPQ9H4A4 650 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 TUT1Q9H6E5 874 aaKnown RBP14.01□□□□□ -0.17
USP40-205ENST00000430158 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
USP40-205ENST00000430158 DISC1Q9NRI5 854 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 MORC2Q9Y6X9 1032 aaPredicted RBP14.01□□□□□ -0.17
USP40-205ENST00000430158 EVPLQ92817 2033 aa14.01□□□□□ -0.17
USP40-205ENST00000430158 IGSF9BQ9UPX0 1349 aa14□□□□□ -0.17
USP40-205ENST00000430158 WDR64B1ANS9 1081 aa14□□□□□ -0.17
USP40-205ENST00000430158 CD4P01730 458 aa14□□□□□ -0.17
USP40-205ENST00000430158 SFNP31947 248 aa14□□□□□ -0.17
USP40-205ENST00000430158 PRPHP41219 470 aa14□□□□□ -0.17
USP40-205ENST00000430158 TXKP42681 527 aa14□□□□□ -0.17
USP40-205ENST00000430158 STAT5BP51692 787 aa14□□□□□ -0.17
USP40-205ENST00000430158 JAK3P52333 1124 aa14□□□□□ -0.17
USP40-205ENST00000430158 RTP1P59025 263 aa14□□□□□ -0.17
USP40-205ENST00000430158 UGCGQ16739 394 aa14□□□□□ -0.17
USP40-205ENST00000430158 TRIM60Q495X7 471 aa14□□□□□ -0.17
USP40-205ENST00000430158 SWSAP1Q6NVH7 229 aa14□□□□□ -0.17
USP40-205ENST00000430158 MIS18BP1Q6P0N0 1132 aa14□□□□□ -0.17
USP40-205ENST00000430158 FAM126BQ8IXS8 530 aa14□□□□□ -0.17
USP40-205ENST00000430158 PLCD3Q8N3E9 789 aa14□□□□□ -0.17
USP40-205ENST00000430158 TOX2Q96NM4 488 aa14□□□□□ -0.17
USP40-205ENST00000430158 HSD17B14Q9BPX1 270 aa14□□□□□ -0.17
USP40-205ENST00000430158 SMARCAD1Q9H4L7 1026 aa14□□□□□ -0.17
USP40-205ENST00000430158 PCDHA12Q9UN75 941 aa14□□□□□ -0.17
USP40-205ENST00000430158 CLIC4Q9Y696 253 aa14□□□□□ -0.17
USP40-205ENST00000430158 ZBTB42B2RXF5 422 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 LAD1O00515 517 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
USP40-205ENST00000430158 PSAPP07602 524 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 TLE2Q04725 743 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 PTPN11Q06124 597 aaPredicted RBP13.99□□□□□ -0.17
USP40-205ENST00000430158 PLCB4Q15147 1175 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 EPHA7Q15375 998 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
USP40-205ENST00000430158 MIER3Q7Z3K6 550 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 IGSF22Q8N9C0 903 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 USP28Q96RU2 1077 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 ERAP1Q9NZ08 941 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 WRAP73Q9P2S5 460 aaPredicted RBP13.99□□□□□ -0.17
USP40-205ENST00000430158 HDAC6Q9UBN7 1215 aa13.99□□□□□ -0.17
USP40-205ENST00000430158 CHMP2AO43633 222 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 SPATA31C1P0DKV0 1188 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 SMIM10L2AP0DMW4 78 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 SMIM10L2BP0DMW5 78 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 NASPP49321 788 aaPredicted RBP13.98□□□□□ -0.17
USP40-205ENST00000430158 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 PDIA5Q14554 519 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 MARCH8Q5T0T0 291 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 FOXD4L5Q5VV16 416 aaPredicted RBP13.98□□□□□ -0.17
USP40-205ENST00000430158 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
USP40-205ENST00000430158 GDF6Q6KF10 455 aaPredicted RBP13.98□□□□□ -0.17
USP40-205ENST00000430158 FOXD4L4Q8WXT5 416 aaPredicted RBP13.98□□□□□ -0.17
USP40-205ENST00000430158 CEP89Q96ST8 783 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 KATNAL1Q9BW62 490 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 ZNF302Q9NR11 478 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 GABBR1Q9UBS5 961 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 GTF2IRD1Q9UHL9 959 aa13.98□□□□□ -0.17
USP40-205ENST00000430158 SLITRK3O94933 977 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 TECP42680 631 aa13.97□□□□□ -0.17
USP40-205ENST00000430158 SLC26A2P50443 739 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms