RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MEIS1O00470 390 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 FOSP01100 380 aaPredicted RBP19.3■□□□□ 0.68
UBE3D-204ENST00000430071 FAM86B2P0C5J1 330 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 SSRP1Q08945 709 aaKnown RBP19.3■□□□□ 0.68
UBE3D-204ENST00000430071 CEP55Q53EZ4 464 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 PPP2R2DQ66LE6 453 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 CNKSR3Q6P9H4 555 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 CPLX2Q6PUV4 134 aaKnown RBP19.3■□□□□ 0.68
UBE3D-204ENST00000430071 CCDC83Q8IWF9 413 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 NSUN7Q8NE18 718 aaKnown RBP19.3■□□□□ 0.68
UBE3D-204ENST00000430071 CRYGNQ8WXF5 182 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 CDHR1Q96JP9 859 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 SLC9A7Q96T83 725 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 ZMYND12Q9H0C1 365 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 EHMT1Q9H9B1 1298 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 AGO4Q9HCK5 861 aaKnown RBP19.3■□□□□ 0.68
UBE3D-204ENST00000430071 SLC9A2Q9UBY0 812 aa19.3■□□□□ 0.68
UBE3D-204ENST00000430071 VCANP13611 3396 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 RSPH10B2B2RC85 870 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 RSPH10BP0C881 870 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 MCM2P49736 904 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.29■□□□□ 0.68
UBE3D-204ENST00000430071 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.29■□□□□ 0.68
UBE3D-204ENST00000430071 DBF4BQ8NFT6 615 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 PPM1EQ8WY54 764 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 VPS54Q9P1Q0 977 aa19.29■□□□□ 0.68
UBE3D-204ENST00000430071 ZNF215Q9UL58 517 aaPredicted RBP19.29■□□□□ 0.68
UBE3D-204ENST00000430071 IGLV3-22A0A075B6J6 115 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 DDX39AO00148 427 aaKnown RBP19.28■□□□□ 0.68
UBE3D-204ENST00000430071 MAFGO15525 162 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 JAK2O60674 1132 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 LGR5O75473 907 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 CDKL5O76039 1030 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 BAIAP3O94812 1187 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 CCNE2O96020 404 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 ACTR2P61160 394 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 AP3B2Q13367 1082 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 MARCH8Q5T0T0 291 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 TRIM22Q8IYM9 498 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 PHOSPHO2Q8TCD6 241 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 AIFM3Q96NN9 605 aa19.28■□□□□ 0.68
UBE3D-204ENST00000430071 JPH1Q9HDC5 661 aaPredicted RBP19.28■□□□□ 0.68
UBE3D-204ENST00000430071 ESYT2A0FGR8 921 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 KCNJ6P48051 423 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.68
UBE3D-204ENST00000430071 TAP1Q03518 808 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 MKRN4PQ13434 485 aaPredicted RBP19.27■□□□□ 0.68
UBE3D-204ENST00000430071 FAM117BQ6P1L5 589 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 PLA2G4DQ86XP0 818 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 TRAPPC12Q8WVT3 735 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 GLG1Q92896 1179 aa19.27■□□□□ 0.68
UBE3D-204ENST00000430071 TTC3P53804 2025 aa19.27■□□□□ 0.67
UBE3D-204ENST00000430071 TTC28Q96AY4 2481 aa19.27■□□□□ 0.67
UBE3D-204ENST00000430071 NFASCO94856 1347 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 STK36Q9NRP7 1315 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 ATG2AQ2TAZ0 1938 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 DLL1O00548 723 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 DHX15O43143 795 aaKnown RBP19.26■□□□□ 0.67
UBE3D-204ENST00000430071 PARNO95453 639 aaKnown RBP19.26■□□□□ 0.67
UBE3D-204ENST00000430071 CHRNA1P02708 482 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 FDPSP14324 419 aaKnown RBP19.26■□□□□ 0.67
UBE3D-204ENST00000430071 IGFBP4P22692 258 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 ZNF76P36508 570 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 IGBP1P78318 339 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 PPFIA1Q13136 1202 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 CCDC85BQ15834 202 aaPredicted RBP19.26■□□□□ 0.67
UBE3D-204ENST00000430071 GRIK4Q16099 956 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 PLEKHG4Q58EX7 1191 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 KRT40Q6A162 431 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 GAS2L1Q99501 681 aaPredicted RBP19.26■□□□□ 0.67
UBE3D-204ENST00000430071 SMARCAD1Q9H4L7 1026 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 ORC3Q9UBD5 711 aaPredicted RBP19.26■□□□□ 0.67
UBE3D-204ENST00000430071 EMSYQ7Z589 1322 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 NRCAMQ92823 1304 aa19.26■□□□□ 0.67
UBE3D-204ENST00000430071 NCOR1O75376 2440 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 DEXIO95424 95 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 CYP3A4P08684 503 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 INSRRP14616 1297 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 SDF4Q9BRK5 362 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 GLT8D2Q9H1C3 349 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 C6orf50Q9HD87 102 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 ERAP1Q9NZ08 941 aa19.25■□□□□ 0.67
UBE3D-204ENST00000430071 ABHD14A-ACY1A0A1B0GW23 586 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 TLL1O43897 1013 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 ATG7O95352 703 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 GNAT1P11488 350 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 IKBKEQ14164 716 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 PLCB4Q15147 1175 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 FAM26DQ5JW98 314 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 REXO1Q8N1G1 1221 aaKnown RBP19.24■□□□□ 0.67
UBE3D-204ENST00000430071 DNAJB3Q8WWF6 145 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 SNX21Q969T3 373 aa19.24■□□□□ 0.67
UBE3D-204ENST00000430071 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
UBE3D-204ENST00000430071 MBLAC1A4D2B0 266 aaPredicted RBP19.23■□□□□ 0.67
UBE3D-204ENST00000430071 MGAT3Q09327 533 aa19.23■□□□□ 0.67
UBE3D-204ENST00000430071 NIPA1Q7RTP0 329 aa19.23■□□□□ 0.67
UBE3D-204ENST00000430071 TEX2Q8IWB9 1127 aa19.23■□□□□ 0.67
UBE3D-204ENST00000430071 LENG9Q96B70 501 aa19.23■□□□□ 0.67
UBE3D-204ENST00000430071 TUBE1Q9UJT0 475 aa19.23■□□□□ 0.67
UBE3D-204ENST00000430071 GJB5O95377 273 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms