RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 LNPEPQ9UIQ6 1025 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 NOVA2Q9UNW9 492 aaKnown RBP9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 TTLL3Q9Y4R7 772 aa9.64□□□□□ -0.87
CDC42BPA-206ENST00000429440 ECE2O60344 883 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 TACC1O75410 805 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 CYLC1P35663 651 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 CCNFP41002 786 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 GUCY2FP51841 1108 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 FOSBP53539 338 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 MAGOHP61326 146 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 GUCY1B3Q02153 619 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 ADRM1Q16186 407 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 DDB1Q16531 1140 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 NEPROQ6NW34 567 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 KRT28Q7Z3Y7 464 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 KIF2BQ8N4N8 673 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PDCD7Q8N8D1 485 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 ANKK1Q8NFD2 765 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 MAGOHBQ96A72 148 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 NUDCD1Q96RS6 583 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 SH3GL1Q99961 368 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 OSBPL10Q9BXB5 764 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 MAK16Q9BXY0 300 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 THAP9Q9H5L6 903 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 DCLRE1BQ9H816 532 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 ZNF180Q9UJW8 692 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 KCNH3Q9ULD8 1083 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 FADS3Q9Y5Q0 445 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 ATP9AO75110 1047 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 ATP5HO75947 161 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PABPC4LP0CB38 370 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 S100A1P23297 94 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 CTNNA1P35221 906 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PDE6CP51160 858 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PMS2P54278 862 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PPARAQ07869 468 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 NSUN2Q08J23 767 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 TEFQ10587 303 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PDCD4Q53EL6 469 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 DAAM2Q86T65 1068 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 LRRC34Q8IZ02 419 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 AGGF1Q8N302 714 aaeCLIP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPATA20Q8TB22 786 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 FERMT2Q96AC1 680 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 NACC2Q96BF6 587 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 ZNF274Q96GC6 653 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 FAM227BQ96M60 508 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 SIKE1Q9BRV8 207 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 RXFP1Q9HBX9 757 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 PFDN4Q9NQP4 134 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 NDUFA13Q9P0J0 144 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 LIMA1Q9UHB6 759 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 USP15Q9Y4E8 981 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 TMEM94Q12767 1356 aa9.63□□□□□ -0.87
CDC42BPA-206ENST00000429440 KANSL1LA0AUZ9 987 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 STRNO43815 780 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 SUN1O94901 812 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 ASMTLO95671 621 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 POLR3DP05423 398 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 HOXD11P31277 338 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 MATR3P43243 847 aaKnown RBP eCLIP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 CUL1Q13616 776 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 KANK3Q6NY19 840 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 FBXO41Q8TF61 875 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 ATXN2LQ8WWM7 1075 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 CASKIN2Q8WXE0 1202 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 ABTB1Q969K4 478 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 TMEM237Q96Q45 408 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 RBM12Q9NTZ6 932 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 NMRK1Q9NWW6 199 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 CYP1A1P04798 512 aaPredicted RBP9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 SPAG1Q07617 926 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 ITGA9Q13797 1035 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 MEA1Q16626 185 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 CFAP221Q4G0U5 840 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 TRIM50Q86XT4 487 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 NAT14Q8WUY8 206 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 DDX12PQ92771 950 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 ATP6V0A1Q93050 837 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 LACRTQ9GZZ8 138 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 ISCUQ9H1K1 167 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 DPH5Q9H2P9 285 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 EPB41L1Q9H4G0 881 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 TIMMDC1Q9NPL8 285 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 FAIMQ9NVQ4 179 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 BTBD7Q9P203 1132 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 N6AMT1Q9Y5N5 214 aa9.62□□□□□ -0.87
CDC42BPA-206ENST00000429440 hCG_2014768A0A024R1R8 64 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 SART1O43290 800 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 NDUFB5O43674 189 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 KDM1AO60341 852 aa9.61□□□□□ -0.87
CDC42BPA-206ENST00000429440 UNC5CO95185 931 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms