RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 ATP8B3O60423 1300 aa18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 XPAP23025 273 aaPredicted RBP18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 TKFCQ3LXA3 575 aa18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 DAAM2Q86T65 1068 aa18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 SIX6OS1Q8N1H7 587 aa18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 LRRC4BQ9NT99 713 aa18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 ODF2LQ9ULJ1 636 aa18.62■□□□□ 0.57
SMARCA4-203ENST00000429416 ADM5C9JUS6 153 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 CAP2P40123 477 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 PPFIA1Q13136 1202 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 CCDC105Q8IYK2 499 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 SRBD1Q8N5C6 995 aaKnown RBP18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 DHTKD1Q96HY7 919 aaPredicted RBP18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 AGBL1Q96MI9 1066 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 OPTNQ96CV9 577 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 ZDHHC15Q96MV8 337 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 POTEFA5A3E0 1075 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 GH1P01241 217 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 POTEIP0CG38 1075 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 POTEGQ6S5H5 508 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 POTEEQ6S8J3 1075 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 ARMCX2Q7L311 632 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 IQCDQ96DY2 449 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 ARHGAP23Q9P227 1491 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 PPP2R3AQ06190 1150 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 FBXO28Q9NVF7 368 aa18.61■□□□□ 0.57
SMARCA4-203ENST00000429416 A6NJR5 290 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 NAPGQ99747 312 aaPredicted RBP18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 PDZD4Q76G19 769 aaPredicted RBP18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 SCN4BQ8IWT1 228 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 RNF139Q8WU17 664 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 POLR3FQ9H1D9 316 aaPredicted RBP18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 IGSF3O75054 1194 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 THEM5Q8N1Q8 247 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 SH2D3AQ9BRG2 576 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 CGNQ9P2M7 1197 aaKnown RBP18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 ACER1Q8TDN7 264 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 PXDNQ92626 1479 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 DISP2A7MBM2 1401 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 ALCAMQ13740 583 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 KLHL7Q8IXQ5 586 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 SLC12A6Q9UHW9 1150 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 AMFRQ9UKV5 643 aa18.6■□□□□ 0.57
SMARCA4-203ENST00000429416 ZNF658Q5TYW1 1059 aaPredicted RBP18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 GLT1D1Q96MS3 346 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 IQGAP1P46940 1657 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 WDR19Q8NEZ3 1342 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 LDHAP00338 332 aaKnown RBP18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 TNFAIP2Q03169 654 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 TBC1D31Q96DN5 1066 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 RAB3IL1Q8TBN0 382 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 RSAD2Q8WXG1 361 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 KATNAL1Q9BW62 490 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 UBE2TQ9NPD8 197 aaPredicted RBP18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 SH3BP5O60239 455 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 RGS2P41220 211 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 RCAN1P53805 252 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 UBLCP1Q8WVY7 318 aaPredicted RBP18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 SELENOSQ9BQE4 189 aa18.59■□□□□ 0.57
SMARCA4-203ENST00000429416 TMEM62Q0P6H9 643 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 SFR1Q86XK3 245 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 ELMOD1Q8N336 334 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 ACTN4O43707 911 aaKnown RBP18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 BNIP3LO60238 219 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 TUBB4AP04350 444 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 ZNF394Q53GI3 561 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 ZNF667Q5HYK9 610 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 RNF180Q86T96 592 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 ARFGAP3Q9NP61 516 aa18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 PIN4Q9Y237 131 aaKnown RBP18.58■□□□□ 0.57
SMARCA4-203ENST00000429416 KIF28PB7ZC32 967 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 PDHBP11177 359 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 COPB1P53618 953 aaKnown RBP18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 NEK9Q8TD19 979 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 EPB41L4AQ9HCS5 686 aaPredicted RBP18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 USP32Q8NFA0 1604 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 PFASO15067 1338 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 STK36Q9NRP7 1315 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 RNF149Q8NC42 400 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 C2orf40Q9H1Z8 148 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 GCNT4Q9P109 453 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 OR6B2Q6IFH4 312 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 C1orf228Q6PIY5 440 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 TTC30AQ86WT1 665 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 FAM213AQ9BRX8 229 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 KCNK9Q9NPC2 374 aa18.58■□□□□ 0.56
SMARCA4-203ENST00000429416 ARHGAP6O43182 974 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 H2AFZP0C0S5 128 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 C8orf74Q6P047 294 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 H2AFVQ71UI9 128 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 CHST13Q8NET6 341 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 SPZ1Q9BXG8 430 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 SLC38A10Q9HBR0 1119 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 ZKSCAN5Q9Y2L8 839 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 HUS1O60921 280 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 MYL1P05976 194 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 USP11P51784 963 aa18.57■□□□□ 0.56
SMARCA4-203ENST00000429416 SGMS1Q86VZ5 419 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms