RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 AFAP1L1Q8TED9 768 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 RNPEPQ9H4A4 650 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 HDAC6Q9UBN7 1215 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 GABBR1Q9UBS5 961 aa25.14■■□□□ 1.62
PTPN18-205ENST00000428843 EVI5O60447 810 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 F13A1P00488 732 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 PTPN11Q06124 597 aaPredicted RBP25.13■■□□□ 1.61
PTPN18-205ENST00000428843 PDXDC2PQ6P474 469 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 SESTD1Q86VW0 696 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 FAM126BQ8IXS8 530 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 C7orf61Q8IZ16 206 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 C7orf31Q8N865 590 aa25.13■■□□□ 1.61
PTPN18-205ENST00000428843 LAD1O00515 517 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 SMIM10L2AP0DMW4 78 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 SMIM10L2BP0DMW5 78 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 ATP2C1P98194 919 aaPredicted RBP25.12■■□□□ 1.61
PTPN18-205ENST00000428843 TOX2Q96NM4 488 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 TSHZ2Q9NRE2 1034 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 GTF2IRD1Q9UHL9 959 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 MAFBQ9Y5Q3 323 aaPredicted RBP25.12■■□□□ 1.61
PTPN18-205ENST00000428843 IGSF9BQ9UPX0 1349 aa25.12■■□□□ 1.61
PTPN18-205ENST00000428843 DNAH12Q6ZR08 3092 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 DCDC2CA8MYV0 355 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 B4GALT4O60513 344 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 ATP4AP20648 1035 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 TECP42680 631 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 SLC26A2P50443 739 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 PLCB4Q15147 1175 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 EPHA7Q15375 998 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 SF3A1Q15459 793 aaKnown RBP25.11■■□□□ 1.61
PTPN18-205ENST00000428843 UGCGQ16739 394 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 GDF6Q6KF10 455 aaPredicted RBP25.11■■□□□ 1.61
PTPN18-205ENST00000428843 FTOQ9C0B1 505 aaKnown RBP eCLIP25.11■■□□□ 1.61
PTPN18-205ENST00000428843 TRPV6Q9H1D0 765 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 KAT6AQ92794 2004 aa25.11■■□□□ 1.61
PTPN18-205ENST00000428843 TRIP12Q14669 1992 aaPredicted RBP25.11■■□□□ 1.61
PTPN18-205ENST00000428843 TLR3O15455 904 aaKnown RBP25.1■■□□□ 1.61
PTPN18-205ENST00000428843 BRD1O95696 1058 aa25.1■■□□□ 1.61
PTPN18-205ENST00000428843 CD4P01730 458 aa25.1■■□□□ 1.61
PTPN18-205ENST00000428843 HIC1Q14526 733 aa25.1■■□□□ 1.61
PTPN18-205ENST00000428843 TRMT13Q9NUP7 481 aaKnown RBP25.1■■□□□ 1.61
PTPN18-205ENST00000428843 ZDHHC9Q9Y397 364 aa25.1■■□□□ 1.61
PTPN18-205ENST00000428843 CLIC4Q9Y696 253 aa25.1■■□□□ 1.61
PTPN18-205ENST00000428843 POTEMA6NI47 508 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 ZNF862O60290 1169 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 PRPHP41219 470 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 FXR2P51116 673 aaKnown RBP eCLIP25.09■■□□□ 1.61
PTPN18-205ENST00000428843 FAAP100Q0VG06 881 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 TMEM266Q2M3C6 531 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 CKAP2LQ8IYA6 745 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 BANK1Q8NDB2 785 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 TRPC6Q9Y210 931 aa25.09■■□□□ 1.61
PTPN18-205ENST00000428843 POTEB3A0JP26 581 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 C17orf102A2RUQ5 167 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 BMP15O95972 392 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 CLTBP09497 229 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 HOXC8P31273 242 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 ZNF200P98182 395 aaPredicted RBP25.08■■□□□ 1.61
PTPN18-205ENST00000428843 IL17AQ16552 155 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 POTEBQ6S5H4 581 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 ATP8B4Q8TF62 1192 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 ATP6V0A1Q93050 837 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 PDLIM7Q9NR12 457 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 SETD4Q9NVD3 440 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 DAXXQ9UER7 740 aaPredicted RBP25.08■■□□□ 1.61
PTPN18-205ENST00000428843 CEP131Q9UPN4 1083 aa25.08■■□□□ 1.61
PTPN18-205ENST00000428843 P4HBP07237 508 aaKnown RBP25.07■■□□□ 1.6
PTPN18-205ENST00000428843 DDIT3P35638 169 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 PSMC5P62195 406 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 PRKCEQ02156 737 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 PPFIA1Q13136 1202 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 PTGISQ16647 500 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 DTHD1Q6ZMT9 781 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 TRMT1LQ7Z2T5 733 aaKnown RBP25.07■■□□□ 1.6
PTPN18-205ENST00000428843 DYDC2Q96IM9 177 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 USP28Q96RU2 1077 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 EIF2AK1Q9BQI3 630 aaKnown RBP25.07■■□□□ 1.6
PTPN18-205ENST00000428843 RGL1Q9NZL6 768 aa25.07■■□□□ 1.6
PTPN18-205ENST00000428843 RBM19Q9Y4C8 960 aaKnown RBP25.07■■□□□ 1.6
PTPN18-205ENST00000428843 HBP1O60381 514 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 INSRRP14616 1297 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 QARSP47897 775 aaKnown RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 CEBPZQ03701 1054 aaKnown RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 PTPAQ15257 358 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 GRIK4Q16099 956 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 FOXD4L6Q3SYB3 417 aaPredicted RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 ARL6IP4Q66PJ3 421 aaKnown RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 FOXD4L3Q6VB84 417 aaPredicted RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 SH3RF1Q7Z6J0 888 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 LMBR1Q8WVP7 490 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 TNPO1Q92973 898 aaKnown RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 CTAGE1Q96RT6 745 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 PRDM5Q9NQX1 630 aaPredicted RBP25.06■■□□□ 1.6
PTPN18-205ENST00000428843 TMEM39AQ9NV64 488 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 NR2E3Q9Y5X4 410 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 NRCAMQ92823 1304 aa25.06■■□□□ 1.6
PTPN18-205ENST00000428843 OATP04181 439 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 GNAT1P11488 350 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 ADAM17P78536 824 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 CYP4A11Q02928 519 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms