RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 GTF3C6Q969F1 213 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 NKD2Q969F2 451 aaPredicted RBP9.95□□□□□ -0.82
HDAC1-202ENST00000428704 ZFRQ96KR1 1074 aaKnown RBP9.95□□□□□ -0.82
HDAC1-202ENST00000428704 ZSCAN10Q96SZ4 725 aaPredicted RBP9.95□□□□□ -0.82
HDAC1-202ENST00000428704 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
HDAC1-202ENST00000428704 CPVLQ9H3G5 476 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 GPCPD1Q9NPB8 672 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 HOMER2Q9NSB8 354 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 RNF146Q9NTX7 359 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 FBXO40Q9UH90 709 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 DMDP11532 3685 aa9.95□□□□□ -0.82
HDAC1-202ENST00000428704 FAM186AA6NE01 2351 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 ICAM1P05362 532 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 MYL3P08590 195 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 GOLGA8HP0CJ92 632 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 CNTN2Q02246 1040 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 GPM6BQ13491 265 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 COL9A3Q14050 684 aaPredicted RBP9.94□□□□□ -0.82
HDAC1-202ENST00000428704 EPC2Q52LR7 807 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 LARP1BQ659C4 914 aaKnown RBP9.94□□□□□ -0.82
HDAC1-202ENST00000428704 IQCA1Q86XH1 822 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 CCDC155Q8N6L0 562 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 FAM133AQ8N9E0 248 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 PNMA1Q8ND90 353 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 GPT2Q8TD30 523 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 SAMD11Q96NU1 681 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 KRT23Q9C075 422 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 ACAD9Q9H845 621 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 CNNM2Q9H8M5 875 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 GRPEL1Q9HAV7 217 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 A1CFQ9NQ94 594 aaKnown RBP9.94□□□□□ -0.82
HDAC1-202ENST00000428704 Q9Y3F1 56 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 INSL6Q9Y581 213 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 NCOR2Q9Y618 2525 aa9.94□□□□□ -0.82
HDAC1-202ENST00000428704 ABHD14A-ACY1A0A1B0GW23 586 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 ASB14A6NK59 587 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 EFCAB14O75071 495 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 ALAS1P13196 640 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
HDAC1-202ENST00000428704 LTBRP36941 435 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 ANTXR2P58335 489 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 HMGN5P82970 282 aaKnown RBP9.93□□□□□ -0.82
HDAC1-202ENST00000428704 TKFCQ3LXA3 575 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 TPRNQ4KMQ1 711 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 MCTP2Q6DN12 878 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 IQSEC1Q6DN90 963 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 FRMD5Q7Z6J6 570 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 GAS2L3Q86XJ1 694 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 NECAB1Q8N987 351 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 PPP1R13LQ8WUF5 828 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 RMDN1Q96DB5 314 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 ASIC4Q96FT7 647 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 TRERF1Q96PN7 1200 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 MTG1Q9BT17 334 aaPredicted RBP9.93□□□□□ -0.82
HDAC1-202ENST00000428704 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 PDGFCQ9NRA1 345 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 CCPG1Q9ULG6 757 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 GVINP1Q7Z2Y8 2422 aa9.93□□□□□ -0.82
HDAC1-202ENST00000428704 KMT2BQ9UMN6 2715 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 H3BNC9 293 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 NFIBO00712 420 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 PURAQ00577 322 aaKnown RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 DLX2Q07687 328 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 MMRN1Q13201 1228 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 IKBKEQ14164 716 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 ZSCAN23Q3MJ62 389 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 CCDC178Q5BJE1 867 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 GPATCH4Q5T3I0 446 aaKnown RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 FBXO16Q8IX29 292 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 MB21D2Q8IYB1 491 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 NCOA7Q8NI08 942 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 CAGE1Q8TC20 777 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 AFAP1L1Q8TED9 768 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 CLEC4DQ8WXI8 215 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 BRF1Q92994 677 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 SYAP1Q96A49 352 aaPredicted RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 PURBQ96QR8 312 aaKnown RBP9.92□□□□□ -0.82
HDAC1-202ENST00000428704 MTA3Q9BTC8 594 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 KAT14Q9H8E8 782 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 CYP39A1Q9NYL5 469 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 CD207Q9UJ71 328 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 KIF3AQ9Y496 699 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 CHD8Q9HCK8 2581 aa9.92□□□□□ -0.82
HDAC1-202ENST00000428704 SCN5AQ14524 2016 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 LOC730098B7Z3J9 87 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 LETM1O95202 739 aaPredicted RBP9.91□□□□□ -0.82
HDAC1-202ENST00000428704 SELPP16109 830 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 PDIA3P30101 505 aaKnown RBP9.91□□□□□ -0.82
HDAC1-202ENST00000428704 MCM5P33992 734 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 CPT1AP50416 773 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 UBE2HP62256 183 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 SCRN1Q12765 414 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 SLC35G1Q2M3R5 365 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 CTC1Q2NKJ3 1217 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 ASPRV1Q53RT3 343 aa9.91□□□□□ -0.82
HDAC1-202ENST00000428704 TMEM63BQ5T3F8 832 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms