RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 PSMC6P62333 389 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 HDLBPQ00341 1268 aaKnown RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 ITGB3BPQ13352 177 aaPredicted RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 PTGISQ16647 500 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 WHAMMQ8TF30 809 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 ZNF473Q8WTR7 871 aaKnown RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 CCT8L2Q96SF2 557 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 POTEFA5A3E0 1075 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 MEIS1O00470 390 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 RAD21O60216 631 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 MED24O75448 989 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 KIF4AO95239 1232 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 POTEIP0CG38 1075 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 GUCY2CP25092 1073 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 MDH1P40925 334 aaKnown RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 TNNC1P63316 161 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 UAP1Q16222 522 aaPredicted RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 ASPRV1Q53RT3 343 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 FAM182BQ5T319 152 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 DPY19L2P1Q6NXN4 242 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 POTEGQ6S5H5 508 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 POTEEQ6S8J3 1075 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 B4GALNT4Q76KP1 1039 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 CD302Q8IX05 232 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 OTUD6BQ8N6M0 293 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 RBM46Q8TBY0 533 aaKnown RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 PPANQ9NQ55 473 aaKnown RBP17.24■□□□□ 0.35
GHDC-203ENST00000428494 HDAC9Q9UKV0 1011 aa17.24■□□□□ 0.35
GHDC-203ENST00000428494 LTBP4Q8N2S1 1624 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 F8W031 263 aaPredicted RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 MEFVO15553 781 aaPredicted RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 MYBP10242 640 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 ITGA4P13612 1032 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 UCHL3P15374 230 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 MARSP56192 900 aaKnown RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 CUL5Q93034 780 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 SPAG5Q96R06 1193 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 AJAP1Q9UKB5 411 aaPredicted RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 E7EVH7 732 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 hCG_1984214I3L0E3 225 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 CETN3O15182 167 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 GNA14O95837 355 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 SNHG28P0DPA3 235 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 HSPA9P38646 679 aaKnown RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 ZNF543Q08ER8 600 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 SEPT2Q15019 361 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 GJB7Q6PEY0 223 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 FOXR2Q6PJQ5 311 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 NLRP14Q86W24 1093 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 ZNF713Q8N859 430 aaPredicted RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 BCCIPQ9P287 314 aaKnown RBP eCLIP17.23■□□□□ 0.35
GHDC-203ENST00000428494 NAGPAQ9UK23 515 aa17.23■□□□□ 0.35
GHDC-203ENST00000428494 TNRC6CQ9HCJ0 1690 aaKnown RBP17.23■□□□□ 0.35
GHDC-203ENST00000428494 TMCO5BA8MYB1 307 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 BACH1O14867 736 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 SART1O43290 800 aaKnown RBP17.22■□□□□ 0.35
GHDC-203ENST00000428494 HOXD13P35453 343 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 ALKBH5Q6P6C2 394 aaKnown RBP17.22■□□□□ 0.35
GHDC-203ENST00000428494 METTL13Q8N6R0 699 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 LRRC57Q8N9N7 239 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 MYCBPAPQ8TBZ2 947 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 SCFD2Q8WU76 684 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 TMBIM4Q9HC24 238 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 LRRC4CQ9HCJ2 640 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 A6NNZ2 444 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 KIAA0754O94854 1291 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 FNTAP49354 379 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 USP11P51784 963 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 TUBB8Q3ZCM7 444 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 DCAF17Q5H9S7 520 aaPredicted RBP17.22■□□□□ 0.35
GHDC-203ENST00000428494 RNF187Q5TA31 235 aaPredicted RBP17.22■□□□□ 0.35
GHDC-203ENST00000428494 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
GHDC-203ENST00000428494 NT5C3AQ9H0P0 336 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 AMACRQ9UHK6 382 aa17.22■□□□□ 0.35
GHDC-203ENST00000428494 RTCBQ9Y3I0 505 aaKnown RBP17.22■□□□□ 0.35
GHDC-203ENST00000428494 H0YGN5 161 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 PON1P27169 355 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 TMOD1P28289 359 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 RFC4P35249 363 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 MRPL12P52815 198 aaKnown RBP17.21■□□□□ 0.35
GHDC-203ENST00000428494 IFT88Q13099 833 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 EMC10Q5UCC4 262 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 IKZF4Q9H2S9 585 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 DDX4Q9NQI0 724 aaKnown RBP17.21■□□□□ 0.35
GHDC-203ENST00000428494 NFS1Q9Y697 457 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 HMGB1P1B2RPK0 211 aaPredicted RBP17.21■□□□□ 0.35
GHDC-203ENST00000428494 H0YHG0 523 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 PLCG2P16885 1265 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 CASP4P49662 377 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 PABPC4Q13310 644 aaKnown RBP eCLIP17.21■□□□□ 0.35
GHDC-203ENST00000428494 HYIQ5T013 277 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 TCERG1LQ5VWI1 586 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
GHDC-203ENST00000428494 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
GHDC-203ENST00000428494 DAGLAQ9Y4D2 1042 aa17.21■□□□□ 0.35
GHDC-203ENST00000428494 DCDC2CA8MYV0 355 aa17.2■□□□□ 0.34
GHDC-203ENST00000428494 DAPK3O43293 454 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms