RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 FZD9O00144 591 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 FLOT1O75955 427 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 PPP2R3AQ06190 1150 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 TRIM59Q8IWR1 403 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 ZC3H3Q8IXZ2 948 aaKnown RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 BAP1Q92560 729 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 SLC38A10Q9HBR0 1119 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 ARHGAP20Q9P2F6 1191 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 RPTORQ8N122 1335 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 IPO5O00410 1097 aaKnown RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 CTNND1O60716 968 aaKnown RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 NR2F2P24468 414 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 ADAM9Q13443 819 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 B3GNT9Q6UX72 402 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 BANK1Q8NDB2 785 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 CEP63Q96MT8 703 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 MXRA8Q9BRK3 442 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 RPAP3Q9H6T3 665 aaPredicted RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 CGNQ9P2M7 1197 aaKnown RBP15.31■□□□□ 0.04
NCBP2-205ENST00000428425 DUSP10Q9Y6W6 482 aa15.31■□□□□ 0.04
NCBP2-205ENST00000428425 SPDYE4A6NLX3 237 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 NOL4O94818 638 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 HOXA7P31268 230 aaPredicted RBP15.3■□□□□ 0.04
NCBP2-205ENST00000428425 MRPS9P82933 396 aaKnown RBP15.3■□□□□ 0.04
NCBP2-205ENST00000428425 SPP2Q13103 211 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 KNOP1Q1ED39 458 aaKnown RBP15.3■□□□□ 0.04
NCBP2-205ENST00000428425 C1orf186Q6ZWK4 172 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 RRAGAQ7L523 313 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 KSR1Q8IVT5 923 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 ZNF397Q8NF99 534 aaPredicted RBP15.3■□□□□ 0.04
NCBP2-205ENST00000428425 LPAR1Q92633 364 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 TUFT1Q9NNX1 390 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 PLAGL2Q9UPG8 496 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 ASTN1O14525 1302 aa15.3■□□□□ 0.04
NCBP2-205ENST00000428425 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 TRPM4Q8TD43 1214 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 KCNH7Q9NS40 1196 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 ZNHIT6Q9NWK9 470 aaKnown RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 ZNF446Q9NWS9 450 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 TBCAO75347 108 aaKnown RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 GCNT3O95395 438 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 HNRNPH3P31942 346 aaKnown RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 ITGB3BPQ13352 177 aaPredicted RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 EDRF1Q3B7T1 1238 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 ZC2HC1CQ53FD0 456 aaPredicted RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 ANGEL2Q5VTE6 544 aaKnown RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 SYTL5Q8TDW5 730 aaPredicted RBP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 UBXN4Q92575 508 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 TAAR1Q96RJ0 339 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 LXNQ9BS40 222 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 EHMT1Q9H9B1 1298 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 NLRC4Q9NPP4 1024 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
NCBP2-205ENST00000428425 ZMYM2Q9UBW7 1377 aa15.29■□□□□ 0.04
NCBP2-205ENST00000428425 DHX15O43143 795 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 H2AFXP16104 143 aaPredicted RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 EIF2AK2P19525 551 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 CASP4P49662 377 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 RPS6P62753 249 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 CCDC122Q5T0U0 273 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 TEX2Q8IWB9 1127 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 ATG4CQ96DT6 458 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 LSM14BQ9BX40 385 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 TEKT3Q9BXF9 490 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 PUF60Q9UHX1 559 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 TRAF3IP3Q9Y228 551 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 RIPK3Q9Y572 518 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 DOCK1Q14185 1865 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 PARP14Q460N5 1801 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 CTAGE9A4FU28 777 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 EFCAB8A8MWE9 144 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 EIF3CLB5ME19 914 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 ENC1O14682 589 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 CLIC2O15247 247 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 AKAP3O75969 853 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 EIF4A3P38919 411 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 CDK17Q00537 523 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 SETQ01105 290 aaPredicted RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 WRNIP1Q96S55 665 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 FIZ1Q96SL8 496 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 EIF3CQ99613 913 aaKnown RBP15.28■□□□□ 0.04
NCBP2-205ENST00000428425 HDAC6Q9UBN7 1215 aa15.28■□□□□ 0.04
NCBP2-205ENST00000428425 LTBP3Q9NS15 1303 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 CETN3O15182 167 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 TGFB1I1O43294 461 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 TLR2O60603 784 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 YBX3P16989 372 aaKnown RBP eCLIP15.27■□□□□ 0.04
NCBP2-205ENST00000428425 ZSCAN20P17040 1043 aaPredicted RBP15.27■□□□□ 0.04
NCBP2-205ENST00000428425 CYLC1P35663 651 aaPredicted RBP15.27■□□□□ 0.04
NCBP2-205ENST00000428425 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 TKFCQ3LXA3 575 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 TEX35Q5T0J7 233 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 PDXDC1Q6P996 788 aa15.27■□□□□ 0.04
NCBP2-205ENST00000428425 DLK2Q6UY11 383 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms