RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ERGIC2Q96RQ1 377 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 RIT2Q99578 217 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 DNAJC7Q99615 494 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 TTYH3Q9C0H2 523 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.51□□□□□ -0.57
HDAC9-210ENST00000428307 V9GYY5 206 aaPredicted RBP11.51□□□□□ -0.57
HDAC9-210ENST00000428307 RPTORQ8N122 1335 aa11.51□□□□□ -0.57
HDAC9-210ENST00000428307 EPHB6O15197 1021 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 URI1O94763 535 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-210ENST00000428307 GCNT3O95395 438 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 TUBB4AP04350 444 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 HOXD13P35453 343 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 COG2Q14746 738 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 EPHA7Q15375 998 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 SUPT20HL1Q3ZLR7 823 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 PCNX4Q63HM2 1172 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 B3GNT9Q6UX72 402 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 C1orf186Q6ZWK4 172 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 MYCT1Q8N699 235 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 NACC1Q96RE7 527 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 NUP58Q9BVL2 599 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 TESPA1A2RU30 521 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-210ENST00000428307 DHX15O43143 795 aaKnown RBP11.5□□□□□ -0.57
HDAC9-210ENST00000428307 FAM13AO94988 1023 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 NR2F2P24468 414 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-210ENST00000428307 PLS1Q14651 629 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 PGM5Q15124 567 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 KNOP1Q1ED39 458 aaKnown RBP11.5□□□□□ -0.57
HDAC9-210ENST00000428307 ARHGEF16Q5VV41 709 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 MIER3Q7Z3K6 550 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 ZNF710Q8N1W2 664 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 RETREG2Q8NC44 543 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 IKZF4Q9H2S9 585 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 UBIAD1Q9Y5Z9 338 aa11.5□□□□□ -0.57
HDAC9-210ENST00000428307 EPN1Q9Y6I3 576 aaPredicted RBP11.5□□□□□ -0.57
HDAC9-210ENST00000428307 PHLPP2Q6ZVD8 1323 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ATP9AO75110 1047 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 USP2O75604 605 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 NDUFA10O95299 355 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 BCRP11274 1271 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 CASQ1P31415 396 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 DSG3P32926 999 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ZBED6P86452 979 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ZNF397Q8NF99 534 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 PDCD2LQ9BRP1 358 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 CRACR2AQ9BSW2 395 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 AGO4Q9HCK5 861 aaKnown RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 RNF181Q9P0P0 153 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 SIK3Q9Y2K2 1263 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 CETN3O15182 167 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 GHRHRQ02643 423 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 TMEM132BQ14DG7 1078 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ARHGAP29Q52LW3 1261 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 FOXR2Q6PJQ5 311 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 KSR1Q8IVT5 923 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 CNKSR2Q8WXI2 1034 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 L2HGDHQ9H9P8 463 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 PXMP2Q9NR77 195 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ZNHIT6Q9NWK9 470 aaKnown RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 TMOD4Q9NZQ9 345 aa11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.49□□□□□ -0.57
HDAC9-210ENST00000428307 ADM5C9JUS6 153 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 CLIC2O15247 247 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 PEX10O60683 326 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 SLU7O95391 586 aaKnown RBP11.48□□□□□ -0.57
HDAC9-210ENST00000428307 NCBP1Q09161 790 aaKnown RBP11.48□□□□□ -0.57
HDAC9-210ENST00000428307 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.48□□□□□ -0.57
HDAC9-210ENST00000428307 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
HDAC9-210ENST00000428307 KCTD17Q8N5Z5 321 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 LRRN4CLQ8ND94 238 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
HDAC9-210ENST00000428307 CEP63Q96MT8 703 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
HDAC9-210ENST00000428307 TFR2Q9UP52 801 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 AFG3L2Q9Y4W6 797 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 ARHGEF35A5YM69 484 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 FDX1P10109 184 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 KCNMA1Q12791 1236 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 VGLL4Q14135 290 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 EDRF1Q3B7T1 1238 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 TRIM59Q8IWR1 403 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 C12orf42Q96LP6 360 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 TRAF3IP3Q9Y228 551 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 PPP2R3BQ9Y5P8 575 aa11.48□□□□□ -0.57
HDAC9-210ENST00000428307 TMEM150BA6NC51 233 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 KIF5CO60282 957 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 GNA14O95837 355 aa11.47□□□□□ -0.57
HDAC9-210ENST00000428307 P4HBP07237 508 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms