RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 BCAS3Q9H6U6 928 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 PXMP2Q9NR77 195 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 CAPN11Q9UMQ6 739 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 LUC7L2Q9Y383 392 aaKnown RBP24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 AFG3L2Q9Y4W6 797 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 PTPRFP10586 1907 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 ETF1P62495 437 aaKnown RBP24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 ITGB3BPQ13352 177 aaPredicted RBP24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 COG2Q14746 738 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 TRIM65Q6PJ69 517 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 ERGIC2Q96RQ1 377 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 TTYH3Q9C0H2 523 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 COL4A3BPQ9Y5P4 624 aa24.08■■□□□ 1.45
CNEP1R1-202ENST00000427478 PAPPA2Q9BXP8 1791 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 GOLGA6L9A6NEM1 432 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 RASSF10A6NK89 507 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 ADM5C9JUS6 153 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 MYBP10242 640 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 MUTP22033 750 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 BAATQ14032 418 aaPredicted RBP24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 ARHGEF16Q5VV41 709 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 CYP26C1Q6V0L0 522 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 CATSPERGQ6ZRH7 1159 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 MIER3Q7Z3K6 550 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 NACC1Q96RE7 527 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 PDCD2LQ9BRP1 358 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 NUP58Q9BVL2 599 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 ZNF214Q9UL59 606 aaPredicted RBP24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 ADGRG1Q9Y653 693 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 DHX15O43143 795 aaKnown RBP24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 TUBB4AP04350 444 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 VGLL4Q14135 290 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 CCDC40Q4G0X9 1142 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 MRPL44Q9H9J2 332 aaKnown RBP24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 DNAI1Q9UI46 699 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 ADAMTS5Q9UNA0 930 aa24.07■■□□□ 1.44
CNEP1R1-202ENST00000427478 OAZ1P54368 228 aa24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 TMEM132BQ14DG7 1078 aa24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 C1orf186Q6ZWK4 172 aa24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 EPM2AIP1Q7L775 607 aaPredicted RBP24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 OR8K1Q8NGG5 319 aa24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 CEP63Q96MT8 703 aa24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 SNCAIPQ9Y6H5 919 aa24.06■■□□□ 1.44
CNEP1R1-202ENST00000427478 SFI1A8K8P3 1242 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 PRPF6O94906 941 aaKnown RBP24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 NEK9Q8TD19 979 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 DCPSQ96C86 337 aaKnown RBP24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 DNAJC7Q99615 494 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 AGPAT5Q9NUQ2 364 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 MYH11P35749 1972 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 FAM13AO94988 1023 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 SULF1Q8IWU6 871 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 RETREG2Q8NC44 543 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 CHP1Q99653 195 aa24.05■■□□□ 1.44
CNEP1R1-202ENST00000427478 GCNT3O95395 438 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 YBX3P16989 372 aaKnown RBP eCLIP24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 GAP43P17677 238 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 KNOP1Q1ED39 458 aaKnown RBP24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 PPP4R3CPQ6ZMV5 832 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 SYT17Q9BSW7 474 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 SAMM50Q9Y512 469 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 PHLPP2Q6ZVD8 1323 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 TESPA1A2RU30 521 aaPredicted RBP24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 HOXD13P35453 343 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 EDRF1Q3B7T1 1238 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 ACRBPQ8NEB7 543 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 SIK3Q9Y2K2 1263 aa24.04■■□□□ 1.44
CNEP1R1-202ENST00000427478 LOC285556D6RIA3 1793 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 A0A0U1RQJ8 604 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 MAP3K9P80192 1104 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 ADAM9Q13443 819 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 TSR1Q2NL82 804 aaKnown RBP24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 ZC3H3Q8IXZ2 948 aaKnown RBP24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 MYCT1Q8N699 235 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 ATRIPQ8WXE1 791 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 TEX13BQ9BXU2 312 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 OLFML3Q9NRN5 406 aa24.03■■□□□ 1.44
CNEP1R1-202ENST00000427478 SPDYE16A6NNV3 312 aaPredicted RBP24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 GNA14O95837 355 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 NR2F2P24468 414 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 PLS1Q14651 629 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 C9orf131Q5VYM1 1079 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 CNKSR2Q8WXI2 1034 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 LZTFL1Q9NQ48 299 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 TBC1D22BQ9NU19 505 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 KIAA1217Q5T5P2 1943 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 ARHGEF35A5YM69 484 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 FANCGO15287 622 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 P4HBP07237 508 aaKnown RBP24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 ZBED6P86452 979 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 BMT2Q1RMZ1 405 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 FIGNQ5HY92 759 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 SH3D19Q5HYK7 790 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 WDR59Q6PJI9 974 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 PARVGQ9HBI0 331 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 TRAF3IP3Q9Y228 551 aa24.02■■□□□ 1.44
CNEP1R1-202ENST00000427478 CETN3O15182 167 aa24.01■■□□□ 1.43
CNEP1R1-202ENST00000427478 CTIFO43310 598 aaKnown RBP24.01■■□□□ 1.43
CNEP1R1-202ENST00000427478 ATP9AO75110 1047 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms