RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 BCAS3Q9H6U6 928 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 PCDHA1Q9Y5I3 950 aa16.44■□□□□ 0.22
HDAC6-206ENST00000426196 A0A0D9SFI3 127 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-206ENST00000426196 STAM2O75886 525 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 POLR2MP0CAP2 368 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 RUFY4Q6ZNE9 571 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 FCHSD1Q86WN1 690 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 FAM227BQ96M60 508 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 CDCA3Q99618 268 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-206ENST00000426196 FTHL17Q9BXU8 183 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 SUPT16HQ9Y5B9 1047 aaKnown RBP16.43■□□□□ 0.22
HDAC6-206ENST00000426196 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 ZNF292O60281 2723 aa16.43■□□□□ 0.22
HDAC6-206ENST00000426196 PER2O15055 1255 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 PPFIA3O75145 1194 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 UBE3AQ05086 875 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 TRAF1Q13077 416 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 ATP8B4Q8TF62 1192 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 NKD2Q969F2 451 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-206ENST00000426196 TUBE1Q9UJT0 475 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 PCDHB12Q9Y5F1 795 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
HDAC6-206ENST00000426196 ZBTB5O15062 677 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 FIBPO43427 364 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 RPLP2P05387 115 aaKnown RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 CD52P31358 61 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 SP4Q02446 784 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 SPOUT1Q5T280 376 aaKnown RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 UBALD2Q8IYN6 164 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 KREMEN2Q8NCW0 462 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 DNAJB3Q8WWF6 145 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 LINC01599Q8WXQ3 324 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 INPP4AQ96PE3 977 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 LRFN2Q9ULH4 789 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 NR2E1Q9Y466 385 aa16.41■□□□□ 0.22
HDAC6-206ENST00000426196 FNDC1Q4ZHG4 1894 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-206ENST00000426196 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 ZNF213O14771 459 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 PPP1R11O60927 126 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 MRPS6P82932 125 aaKnown RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 MTMR3Q13615 1198 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 DUSP6Q16828 381 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 PDE12Q6L8Q7 609 aaKnown RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 CRIPAKQ8N1N5 446 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 VN1R2Q8NFZ6 395 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 AAASQ9NRG9 546 aa16.4■□□□□ 0.22
HDAC6-206ENST00000426196 ZBTB47Q9UFB7 747 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 TPRP12270 2363 aaKnown RBP16.4■□□□□ 0.22
HDAC6-206ENST00000426196 FRYLO94915 3013 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 M0QZ92 97 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 SCG2P13521 617 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
HDAC6-206ENST00000426196 MRPS9P82933 396 aaKnown RBP16.39■□□□□ 0.21
HDAC6-206ENST00000426196 GRIK4Q16099 956 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 IER5Q5VY09 327 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 FRMD5Q7Z6J6 570 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 TICAM2Q86XR7 235 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 ADSSL1Q8N142 457 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 STAG2Q8N3U4 1231 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 TMEM105Q8N8V8 129 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 MTMR8Q96EF0 704 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 AGO3Q9H9G7 860 aaKnown RBP16.39■□□□□ 0.21
HDAC6-206ENST00000426196 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 RCAN3Q9UKA8 241 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 SORCS3Q9UPU3 1222 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 SQORQ9Y6N5 450 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 DNAH14Q0VDD8 3507 aa16.39■□□□□ 0.21
HDAC6-206ENST00000426196 MBLAC1A4D2B0 266 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-206ENST00000426196 B4E1Z4 1266 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 TECP42680 631 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 GATMP50440 423 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 PAK2Q13177 524 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 SEMA3FQ13275 785 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-206ENST00000426196 ASTLQ6HA08 431 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-206ENST00000426196 ANKRD54Q6NXT1 300 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 RTN4RL1Q86UN2 441 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-206ENST00000426196 HOMER1Q86YM7 354 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 GIMAP8Q8ND71 665 aaPredicted RBP16.38■□□□□ 0.21
HDAC6-206ENST00000426196 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 UBAC1Q9BSL1 405 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 S1PR5Q9H228 398 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 ERAP1Q9NZ08 941 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 RTEL1Q9NZ71 1219 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 FRMPD4Q14CM0 1322 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 SALL3Q9BXA9 1300 aa16.38■□□□□ 0.21
HDAC6-206ENST00000426196 FGF18O76093 207 aa16.37■□□□□ 0.21
HDAC6-206ENST00000426196 HOXB8P17481 243 aaPredicted RBP16.37■□□□□ 0.21
HDAC6-206ENST00000426196 MARK3P27448 753 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms