RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 A0A0G2JLL6 359 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 FRMD3A2A2Y4 597 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 ARHGEF35A5YM69 484 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 SPDYE16A6NNV3 312 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 LGALS16A8MUM7 142 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 ARHGAP6O43182 974 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 ZSCAN12O43309 604 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 CHMP2AO43633 222 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 STX10O60499 249 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 SLC25A27O95847 323 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 NR3C2P08235 984 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 ARP10275 920 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 MYCLP12524 364 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 TAL1P17542 331 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 EIF2AK2P19525 551 aaKnown RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 MTIF2P46199 727 aaKnown RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 TBX2Q13207 712 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 BAATQ14032 418 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 PLS1Q14651 629 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 ECM1Q16610 540 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 HSP90AA4PQ58FG1 418 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 RGMBQ6NW40 437 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 LBX2Q6XYB7 198 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 PRRT2Q7Z6L0 340 aaPredicted RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 RIOX2Q8IUF8 465 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 CREBRFQ8IUR6 639 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 RETREG2Q8NC44 543 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 KIAA0895Q8NCT3 520 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 CYP2W1Q8TAV3 490 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 GJA10Q969M2 543 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 OTUD5Q96G74 571 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 DYDC2Q96IM9 177 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 PANX2Q96RD6 677 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 TAAR1Q96RJ0 339 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 BHMT2Q9H2M3 363 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 UNC45AQ9H3U1 944 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 AGO4Q9HCK5 861 aaKnown RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 DBR1Q9UK59 544 aaKnown RBP10.48□□□□□ -0.73
HMGB4-201ENST00000425537 KCNH4Q9UQ05 1017 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 UBE4BO95155 1302 aa10.48□□□□□ -0.73
HMGB4-201ENST00000425537 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 RLFQ13129 1914 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SMCHD1A6NHR9 2005 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 GOLGA6L9A6NEM1 432 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 RASSF10A6NK89 507 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 WDR64B1ANS9 1081 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 PES1O00541 588 aaKnown RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 EIF3DO15371 548 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 CALUO43852 315 aaPredicted RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SLITRK3O94933 977 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 FAM13AO94988 1023 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 LYPLA2O95372 231 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 FCER1AP12319 257 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 ITGB5P18084 799 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 RPL13P26373 211 aaKnown RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 TERF1P54274 439 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 FKBP1BP68106 108 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 CCZ1BP86790 482 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 CCZ1P86791 482 aaPredicted RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 CYP4A11Q02928 519 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 UBXN1Q04323 297 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 PPP2R3AQ06190 1150 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 LRMPQ12912 555 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 DGKZQ13574 1117 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 ALCAMQ13740 583 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 GIT2Q14161 759 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 TMEM132BQ14DG7 1078 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 EDRF1Q3B7T1 1238 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 ANKRD40Q6AI12 368 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 ZNF746Q6NUN9 644 aaPredicted RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 B3GNT9Q6UX72 402 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SLC30A10Q6XR72 485 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 VSIG10LQ86VR7 867 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SMAP1Q8IYB5 467 aaPredicted RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SLC17A8Q8NDX2 589 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SLC10A4Q96EP9 437 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 DUSP9Q99956 384 aaKnown RBP10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SENP7Q9BQF6 1050 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 TUBGCP2Q9BSJ2 902 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 VPS16Q9H269 839 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 ZHX3Q9H4I2 956 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 OLFML3Q9NRN5 406 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 TAB2Q9NYJ8 693 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 CYP39A1Q9NYL5 469 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 PNMA3Q9UL41 463 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 PYCARDQ9ULZ3 195 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 AGTPBP1Q9UPW5 1226 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 SAMM50Q9Y512 469 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 NFASCO94856 1347 aa10.47□□□□□ -0.73
HMGB4-201ENST00000425537 LOC102724159A0A0B4J2E5 919 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 TESPA1A2RU30 521 aaPredicted RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 TRIM49BA6NDI0 452 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 FAM155AB1AL88 458 aaPredicted RBP10.46□□□□□ -0.73
HMGB4-201ENST00000425537 EML1O00423 815 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 IRF6O14896 467 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 SLC10A3P09131 477 aa10.46□□□□□ -0.73
HMGB4-201ENST00000425537 GUCY2CP25092 1073 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms