RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 RPUSD2Q8IZ73 545 aaKnown RBP25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 DDX25Q9UHL0 483 aaKnown RBP25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 NRCAMQ92823 1304 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 SIP14410 1827 aa25.28■■□□□ 1.64
PTCHD3P2-201ENST00000424937 CYP3A7-CYP3A51PA0A087WV96 503 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 FAM205CA6NFA0 338 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 GAS7O60861 476 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 CYP3A7P24462 503 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 RFC2P35250 354 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 HMGN5P82970 282 aaKnown RBP25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 GUCY1B3Q02153 619 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 GRIK4Q16099 956 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 EARS2Q5JPH6 523 aaKnown RBP25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 FAM160B1Q5W0V3 765 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 MIS18BP1Q6P0N0 1132 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 CCDC60Q8IWA6 550 aaPredicted RBP25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 DIS3L2Q8IYB7 885 aaKnown RBP25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 SLC5A5Q92911 643 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 GJA10Q969M2 543 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TEKT3Q9BXF9 490 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 TRPC6Q9Y210 931 aa25.27■■□□□ 1.64
PTCHD3P2-201ENST00000424937 SLC37A4O43826 429 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 FGBP02675 491 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PFKMP08237 780 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PLCB4Q15147 1175 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 LRCH2Q5VUJ6 765 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PLPPR4Q7Z2D5 763 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 FAM184AQ8NB25 1140 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 IL27Q8NEV9 243 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 TNFRSF25Q93038 417 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 VWCEQ96DN2 955 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 C8orf76Q96K31 380 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 MBOAT7Q96N66 472 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ZNF302Q9NR11 478 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 SAMM50Q9Y512 469 aa25.26■■□□□ 1.63
PTCHD3P2-201ENST00000424937 EVPLQ92817 2033 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 IGKV6D-21A0A0A0MT36 114 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 BTBD18B2RXH4 712 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 CHMP2AO43633 222 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 CCNT1O60563 726 aaKnown RBP25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 GCFC2P16383 781 aaKnown RBP25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 THPOP40225 353 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 IGBP1P78318 339 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ADAM17P78536 824 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ZNF618Q5T7W0 954 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 OTOP2Q7RTS6 562 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 SMAP1Q8IYB5 467 aaPredicted RBP25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 RIT2Q99578 217 aa25.25■■□□□ 1.63
PTCHD3P2-201ENST00000424937 LOXHD1Q8IVV2 1947 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 WDR64B1ANS9 1081 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PSAPP07602 524 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 SLC26A2P50443 739 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 SWSAP1Q6NVH7 229 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PDXDC2PQ6P474 469 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ETNPPLQ8TBG4 499 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 HERVK_113Q902F9 699 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 TMX3Q96JJ7 454 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 FTOQ9C0B1 505 aaKnown RBP eCLIP25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 MTIF3Q9H2K0 278 aaKnown RBP25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 TUBE1Q9UJT0 475 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PCDHA10Q9Y5I2 948 aa25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 LAMA2P24043 3122 aaKnown RBP25.24■■□□□ 1.63
PTCHD3P2-201ENST00000424937 POTEB3A0JP26 581 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 INSRRP14616 1297 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 SAFBQ15424 915 aaKnown RBP eCLIP25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PPP4R3AQ6IN85 833 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 TRAF7Q6Q0C0 670 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 POTEBQ6S5H4 581 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 TNPO1Q92973 898 aaKnown RBP25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 NAP1L4Q99733 375 aaKnown RBP25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 UNC45AQ9H3U1 944 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PTPRSQ13332 1948 aa25.23■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ZBBXA8MT70 800 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PSMD10O75832 226 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 CTSHP09668 335 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 MCM2P49736 904 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 RASIP1Q5U651 963 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 RUFY4Q6ZNE9 571 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 DISC1Q9NRI5 854 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 CXXC1Q9P0U4 656 aaPredicted RBP25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 SZT2Q5T011 3432 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 MICAL3Q7RTP6 2002 aa25.22■■□□□ 1.63
PTCHD3P2-201ENST00000424937 RRN3P2A6NIE6 340 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 PARNO95453 639 aaKnown RBP25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ACTN1P12814 892 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 JAK3P52333 1124 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 POTEDQ86YR6 584 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 CKAP2LQ8IYA6 745 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 ATP8B4Q8TF62 1192 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 TRAPPC12Q8WVT3 735 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 GABBR1Q9UBS5 961 aa25.21■■□□□ 1.63
PTCHD3P2-201ENST00000424937 IGSF9BQ9UPX0 1349 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 MBLAC1A4D2B0 266 aaPredicted RBP25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 RSPH10B2B2RC85 870 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 NBNO60934 754 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 CAND2O75155 1236 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 RSPH10BP0C881 870 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 SFNP31947 248 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 SMAD3P84022 425 aaKnown RBP25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 GPNMBQ14956 572 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms