RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 CKAP2LQ8IYA6 745 aa28.6■■■□□ 2.17
TSPAN3-203ENST00000424443 AFAP1L1Q8TED9 768 aa28.6■■■□□ 2.17
TSPAN3-203ENST00000424443 MTMR9Q96QG7 549 aa28.6■■■□□ 2.17
TSPAN3-203ENST00000424443 GABBR1Q9UBS5 961 aa28.6■■■□□ 2.17
TSPAN3-203ENST00000424443 GTF2IRD1Q9UHL9 959 aa28.6■■■□□ 2.17
TSPAN3-203ENST00000424443 VAV3Q9UKW4 847 aa28.6■■■□□ 2.17
TSPAN3-203ENST00000424443 ANP32AP39687 249 aaKnown RBP28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 RESTQ13127 1097 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 NCAPH2Q6IBW4 605 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 RNPEPQ9H4A4 650 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 TMEM39AQ9NV64 488 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 TRPC6Q9Y210 931 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 B4GALT4O60513 344 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 SMIM10L2AP0DMW4 78 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 SMIM10L2BP0DMW5 78 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 GNAT1P11488 350 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 PTGDRQ13258 359 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 TMEM266Q2M3C6 531 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 B3GNT9Q6UX72 402 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 TRPV6Q9H1D0 765 aa28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 TRMT13Q9NUP7 481 aaKnown RBP28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 DAXXQ9UER7 740 aaPredicted RBP28.59■■■□□ 2.17
TSPAN3-203ENST00000424443 C17orf102A2RUQ5 167 aa28.58■■■□□ 2.17
TSPAN3-203ENST00000424443 LAD1O00515 517 aa28.58■■■□□ 2.17
TSPAN3-203ENST00000424443 FAAP100Q0VG06 881 aa28.58■■■□□ 2.17
TSPAN3-203ENST00000424443 PTGISQ16647 500 aa28.58■■■□□ 2.17
TSPAN3-203ENST00000424443 CD4P01730 458 aa28.57■■■□□ 2.16
TSPAN3-203ENST00000424443 GDF6Q6KF10 455 aaPredicted RBP28.57■■■□□ 2.16
TSPAN3-203ENST00000424443 ATP6V0A1Q93050 837 aa28.57■■■□□ 2.16
TSPAN3-203ENST00000424443 PDLIM7Q9NR12 457 aa28.57■■■□□ 2.16
TSPAN3-203ENST00000424443 MAFBQ9Y5Q3 323 aaPredicted RBP28.57■■■□□ 2.16
TSPAN3-203ENST00000424443 NRCAMQ92823 1304 aa28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 POTEB3A0JP26 581 aa28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 PPFIA1Q13136 1202 aa28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 PLCB4Q15147 1175 aa28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 FOXD4L5Q5VV16 416 aaPredicted RBP28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 POTEBQ6S5H4 581 aa28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 FOXD4L4Q8WXT5 416 aaPredicted RBP28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 ZMYND8Q9ULU4 1186 aaPredicted RBP28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 CEP131Q9UPN4 1083 aa28.56■■■□□ 2.16
TSPAN3-203ENST00000424443 EML1O00423 815 aa28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 ZSCAN22P10073 491 aaPredicted RBP28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 TECP42680 631 aa28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 EPHA7Q15375 998 aa28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 TRMT1LQ7Z2T5 733 aaKnown RBP28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 SETD4Q9NVD3 440 aa28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 MYH9P35579 1960 aaKnown RBP28.55■■■□□ 2.16
TSPAN3-203ENST00000424443 DKC1O60832 514 aaKnown RBP eCLIP28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 BMP15O95972 392 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 SYN1P17600 705 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 C4orf32Q8N8J7 132 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 ATP8B4Q8TF62 1192 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 FAM167AQ96KS9 214 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 RAB34Q9BZG1 259 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 IGSF9BQ9UPX0 1349 aa28.54■■■□□ 2.16
TSPAN3-203ENST00000424443 HBP1O60381 514 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 P4HBP07237 508 aaKnown RBP28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 SPIRE1Q08AE8 756 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 BANK1Q8NDB2 785 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 NRBP2Q9NSY0 501 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 TNRC18O15417 2968 aaPredicted RBP28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 RRN3P2A6NIE6 340 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 RAG1P15918 1043 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 PSMC5P62195 406 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 IGBP1P78318 339 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 GRIK4Q16099 956 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 DTHD1Q6ZMT9 781 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 SH3RF1Q7Z6J0 888 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 BBXQ8WY36 941 aaPredicted RBP28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 KAT6AQ92794 2004 aa28.53■■■□□ 2.16
TSPAN3-203ENST00000424443 POTEMA6NI47 508 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 CYP2C9P11712 490 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 INSRRP14616 1297 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 PRPHP41219 470 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 QARSP47897 775 aaKnown RBP28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 ATP2C1P98194 919 aaPredicted RBP28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 PRKCEQ02156 737 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 FAM173BQ6P4H8 233 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 LMBR1Q8WVP7 490 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 PDE4DIPQ5VU43 2346 aa28.52■■■□□ 2.16
TSPAN3-203ENST00000424443 F13A1P00488 732 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 OATP04181 439 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 ZNF200P98182 395 aaPredicted RBP28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 SF3A1Q15459 793 aaKnown RBP28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 UGCGQ16739 394 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 CCDC155Q8N6L0 562 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 ERMNQ8TAM6 284 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 HIPK3Q9H422 1215 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 TBX21Q9UL17 535 aa28.51■■■□□ 2.15
TSPAN3-203ENST00000424443 TRIM43BA6NCK2 446 aa28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 KIAA0355O15063 1070 aa28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 ATP4AP20648 1035 aa28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 FXR2P51116 673 aaKnown RBP eCLIP28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 NEK9Q8TD19 979 aa28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 TRIM43Q96BQ3 446 aaPredicted RBP28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 DYDC2Q96IM9 177 aa28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 LBHD1Q9BQE6 289 aaPredicted RBP28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 EIF2AK1Q9BQI3 630 aaKnown RBP28.5■■■□□ 2.15
TSPAN3-203ENST00000424443 H0YGN5 161 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms