RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 FBXL6Q8N531 539 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 EFHBQ8N7U6 833 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 SMRP1Q8NCR6 262 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 CDHR1Q96JP9 859 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 LNPKQ9C0E8 428 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 FAM86C1Q9NVL1 165 aa17.96■□□□□ 0.47
RPUSD3-204ENST00000424438 LOC730098B7Z3J9 87 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 GHRP10912 638 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 SMARCA1P28370 1054 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 NLRX1Q86UT6 975 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 HOMER1Q86YM7 354 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 MAP3K14Q99558 947 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 KMT2EQ8IZD2 1858 aa17.95■□□□□ 0.46
RPUSD3-204ENST00000424438 TRDNQ13061 729 aa17.94■□□□□ 0.46
RPUSD3-204ENST00000424438 CYB5R4Q7L1T6 521 aa17.94■□□□□ 0.46
RPUSD3-204ENST00000424438 NPAS4Q8IUM7 802 aa17.94■□□□□ 0.46
RPUSD3-204ENST00000424438 SPPL3Q8TCT6 385 aa17.94■□□□□ 0.46
RPUSD3-204ENST00000424438 ERAP1Q9NZ08 941 aa17.94■□□□□ 0.46
RPUSD3-204ENST00000424438 TUBE1Q9UJT0 475 aa17.94■□□□□ 0.46
RPUSD3-204ENST00000424438 RRN3P2A6NIE6 340 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 TCF7P36402 384 aaPredicted RBP17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 PPFIA1Q13136 1202 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 RUFY4Q6ZNE9 571 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 ERMP1Q7Z2K6 904 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 SEPT1Q8WYJ6 367 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 SPZ1Q9BXG8 430 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 CLEC1BQ9P126 229 aa17.93■□□□□ 0.46
RPUSD3-204ENST00000424438 LOXHD1Q8IVV2 1947 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 MAFGO15525 162 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 ITGB1P05556 798 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 STAG3L1P0CL83 205 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 KCNA2P16389 499 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 ATF7P17544 494 aaPredicted RBP17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 NDUFV1P49821 464 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 MRPS6P82932 125 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 UBE3AQ05086 875 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 GRIK4Q16099 956 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 MARCH8Q5T0T0 291 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 UTP14CQ5TAP6 766 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 LINC01599Q8WXQ3 324 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 TNPO1Q92973 898 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 CUL5Q93034 780 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 ZFP91Q96JP5 570 aaPredicted RBP17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 SMARCAD1Q9H4L7 1026 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 MRPL42Q9Y6G3 142 aaKnown RBP17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
RPUSD3-204ENST00000424438 RIF1Q5UIP0 2472 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 ERICH2A1L162 156 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 RBAK-RBAKDNI3L0D1 243 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 MEIS2O14770 477 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 LINC01565O15544 149 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 GTF2F1P35269 517 aaKnown RBP eCLIP17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 NUBP1P53384 320 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 ZXDAP98168 799 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 NUCB1Q02818 461 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 SART3Q15020 963 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 IER5Q5VY09 327 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 TEX2Q8IWB9 1127 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 PHF7Q9BWX1 381 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 ALG13Q9NP73 1137 aaKnown RBP17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 RTEL1Q9NZ71 1219 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 CDY2AQ9Y6F7 541 aa17.91■□□□□ 0.46
RPUSD3-204ENST00000424438 GSTTP1A0A1W2PQM5 241 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 IFIT3O14879 490 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 DNAJB3Q8WWF6 145 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 CDCA3Q99618 268 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 AGO3Q9H9G7 860 aaKnown RBP17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 TELO2Q9Y4R8 837 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 IGSF9BQ9UPX0 1349 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 FNDC1Q4ZHG4 1894 aaPredicted RBP17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 PLXNA4Q9HCM2 1894 aa17.9■□□□□ 0.46
RPUSD3-204ENST00000424438 DNAJB1P25685 340 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 SIGLEC14Q08ET2 396 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 WTAPQ15007 396 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 PDE12Q6L8Q7 609 aaKnown RBP17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 RTN4RL1Q86UN2 441 aaPredicted RBP17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 KLHL23Q8NBE8 558 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 SUSD6Q92537 303 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 LZTS2Q9BRK4 669 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 IGFLR1Q9H665 355 aa17.89■□□□□ 0.45
RPUSD3-204ENST00000424438 GLP2RO95838 553 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 SCG2P13521 617 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 USP17L6PQ6QN14 398 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 CATIPQ7Z7H3 387 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 NME8Q8N427 588 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 ATP8B4Q8TF62 1192 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 POF1BQ8WVV4 589 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 USP15Q9Y4E8 981 aaPredicted RBP17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 SUPT16HQ9Y5B9 1047 aaKnown RBP17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 PCDHA2Q9Y5H9 948 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 TRPV2Q9Y5S1 764 aa17.88■□□□□ 0.45
RPUSD3-204ENST00000424438 UBIAD1Q9Y5Z9 338 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms