RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 POTEB3A0JP26 581 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 POTECB2RU33 542 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 PGRMC1O00264 195 aaKnown RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 RNF8O76064 485 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 FGGP02679 453 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 MARK3P27448 753 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 ERFP50548 548 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 MKRN3Q13064 507 aaKnown RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 KIF22Q14807 665 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 SGO2Q562F6 1265 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 POTEBQ6S5H4 581 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 ZBTB33Q86T24 672 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 SCYL3Q8IZE3 742 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 MCUQ8NE86 351 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 SUPT20HQ8NEM7 779 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 ZBTB22O15209 634 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 TDP2O95551 362 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 PSMC2P35998 433 aaKnown RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 STAT3P40763 770 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 HIBCHQ6NVY1 386 aaPredicted RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 SPATA24Q86W54 205 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 LBHD1Q9BQE6 289 aaPredicted RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 ABHD10Q9NUJ1 306 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 LRRC53A6NM62 1247 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 GOLGA8KD6RF30 607 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 PALMO75781 387 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 PEX3P56589 373 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 GRIN1Q05586 938 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 GABPAQ06546 454 aa11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 CDC37Q16543 378 aaPredicted RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 RIN2Q8WYP3 895 aaPredicted RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 DDX47Q9H0S4 455 aaKnown RBP11.51□□□□□ -0.57
SEMA4D-208ENST00000422704 HIP1RO75146 1068 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 SSTR3P32745 418 aaPredicted RBP11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 PDE6BP35913 854 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 MXI1P50539 228 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 ASPRV1Q53RT3 343 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 SRGAP2CP0DJJ0 459 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 GCLMP48507 274 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 EPHB4P54760 987 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 FMR1Q06787 632 aaKnown RBP eCLIP11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 POTEEQ6S8J3 1075 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 DHX40Q8IX18 779 aaKnown RBP11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 CCT6BQ92526 530 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 AK8Q96MA6 479 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 IWS1Q96ST2 819 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 TRIM10Q9UDY6 481 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 ADGRG1Q9Y653 693 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 ATP10DQ9P241 1426 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 SH3BP5O60239 455 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 SEPT2Q15019 361 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 BRINP3Q76B58 766 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 ATG9AQ7Z3C6 839 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 PASD1Q8IV76 773 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 LMNTD2Q8IXW0 634 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 CCDC17Q96LX7 622 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 ABCC12Q96J65 1359 aa11.5□□□□□ -0.57
SEMA4D-208ENST00000422704 RGPD5Q99666 1765 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 A6NNZ2 444 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 FOSP01100 380 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 BASP1P80723 227 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 TUBB8Q3ZCM7 444 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 LGSNQ5TDP6 509 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 E4F1Q66K89 784 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 CC2D1AQ6P1N0 951 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 RNF10Q8N5U6 811 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 KMT5AQ9NQR1 393 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 SMARCAL1Q9NZC9 954 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 LRRD1A4D1F6 860 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 CNGA1P29973 690 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 SLC7A3Q8WY07 619 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 JPH2Q9BR39 696 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 QTRT2Q9H974 415 aaKnown RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 PARVGQ9HBI0 331 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 INTUQ9ULD6 942 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 TTC7AQ9ULT0 858 aaPredicted RBP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 INPP5FQ9Y2H2 1132 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 CSADQ9Y600 493 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 ZNF185O15231 689 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 MMP10P09238 476 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 TROVE2P10155 538 aaKnown RBP eCLIP11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 MTM1Q13496 603 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 TMED2Q15363 201 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 C10orf76Q5T2E6 689 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 ZNF449Q6P9G9 518 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 FAM47EQ6ZV65 393 aa11.49□□□□□ -0.57
SEMA4D-208ENST00000422704 PANX2Q96RD6 677 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms