RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 NT5C3AQ9H0P0 336 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 RABGAP1Q9Y3P9 1069 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 RNF40O75150 1001 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 AKAP3O75969 853 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 SNHG28P0DPA3 235 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 MYCLP12524 364 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-213ENST00000421756 COPB2P35606 906 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 ATP1A2P50993 1020 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 GUCY2DQ02846 1103 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 ASIC2Q16515 512 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 CCDC70Q6NSX1 233 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 PODNQ7Z5L7 613 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 PHLDB2Q86SQ0 1253 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 CCDC43Q96MW1 224 aaKnown RBP14.67□□□□□ -0.06
MCF2L-213ENST00000421756 EIF2AK1Q9BQI3 630 aaKnown RBP14.67□□□□□ -0.06
MCF2L-213ENST00000421756 SH2D4AQ9H788 454 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 LRRC63Q05C16 580 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 MEA1Q16626 185 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 DACT2Q5SW24 774 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 U2AF1L4Q8WU68 220 aaKnown RBP14.67□□□□□ -0.06
MCF2L-213ENST00000421756 AGBL1Q96MI9 1066 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 NOX5Q96PH1 765 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 USP20Q9Y2K6 914 aa14.67□□□□□ -0.06
MCF2L-213ENST00000421756 LAMB2P55268 1798 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 CASZ1Q86V15 1759 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 CEP104O60308 925 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 GAS7O60861 476 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 XRCC5P13010 732 aaKnown RBP14.66□□□□□ -0.06
MCF2L-213ENST00000421756 PTK2Q05397 1052 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 ZSCAN26Q16670 478 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 PPP4R3AQ6IN85 833 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 OGFOD1Q8N543 542 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 SPATA4Q8NEY3 305 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 TRIM58Q8NG06 486 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 BAP1Q92560 729 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 SELENOOQ9BVL4 669 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 IGKV6D-41A0A0C4DH26 115 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 GOLGA8IPA6NC78 632 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 GOLGA8JA6NMD2 632 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 TMEM119Q4V9L6 283 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 HAUS3Q68CZ6 603 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 C8orf74Q6P047 294 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 CCDC170Q8IYT3 715 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 EHBP1Q8NDI1 1231 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 ERMNQ8TAM6 284 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 CCDC17Q96LX7 622 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 MAGEF1Q9HAY2 307 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 NFU1Q9UMS0 254 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 SNX12Q9UMY4 172 aa14.66□□□□□ -0.06
MCF2L-213ENST00000421756 NOL4O94818 638 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 ARP10275 920 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 ALAS1P13196 640 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 CYP2C19P33261 490 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 GIT2Q14161 759 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 DLGAP5Q15398 846 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 EXOC3L4Q17RC7 722 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 HHIPL2Q6UWX4 724 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 C15orf52Q6ZUT6 534 aaKnown RBP14.65□□□□□ -0.06
MCF2L-213ENST00000421756 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
MCF2L-213ENST00000421756 CERS3Q8IU89 383 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 C10orf67Q8IYJ2 551 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 CCDC66A2RUB6 948 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 STAT2P52630 851 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 SLC27A3Q5K4L6 730 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 SH2D3CQ8N5H7 860 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 EPB41L5Q9HCM4 733 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 ACP6Q9NPH0 428 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 GCNT4Q9P109 453 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 BCCIPQ9P287 314 aaKnown RBP eCLIP14.65□□□□□ -0.06
MCF2L-213ENST00000421756 AJAP1Q9UKB5 411 aaPredicted RBP14.65□□□□□ -0.06
MCF2L-213ENST00000421756 YDJCA8MPS7 323 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 SPATA31C1P0DKV0 1188 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 ODR4Q5SWX8 454 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 ZNF746Q6NUN9 644 aaPredicted RBP14.65□□□□□ -0.06
MCF2L-213ENST00000421756 TMEM179Q6ZVK1 233 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 CREG2Q8IUH2 290 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 ZDHHC15Q96MV8 337 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 RUFY1Q96T51 708 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 MYO1AQ9UBC5 1043 aa14.65□□□□□ -0.06
MCF2L-213ENST00000421756 CKAP4Q07065 602 aaKnown RBP14.64□□□□□ -0.07
MCF2L-213ENST00000421756 LEKR1Q6ZMV7 388 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 RETREG2Q8NC44 543 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 TCEAL9Q9UHQ7 104 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 JRKLQ9Y4A0 524 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 EIF2AK2P19525 551 aaKnown RBP14.64□□□□□ -0.07
MCF2L-213ENST00000421756 NSMFQ6X4W1 530 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 HOOK2Q96ED9 719 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 FAM53CQ9NYF3 392 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 MYH1P12882 1939 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 POTEB2H3BUK9 544 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 ZEB2O60315 1214 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 NR3C1P04150 777 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 CLK2P49760 499 aaKnown RBP14.64□□□□□ -0.07
MCF2L-213ENST00000421756 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 GBP3Q9H0R5 595 aa14.64□□□□□ -0.07
MCF2L-213ENST00000421756 CALCAP01258 141 aa14.63□□□□□ -0.07
MCF2L-213ENST00000421756 CARSP49589 748 aaKnown RBP14.63□□□□□ -0.07
MCF2L-213ENST00000421756 SOX10P56693 466 aa14.63□□□□□ -0.07
MCF2L-213ENST00000421756 PPP1R18Q6NYC8 613 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms