RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 MORF4L1Q9UBU8 362 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 PCDHGA10Q9Y5H3 936 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 PCDHA5Q9Y5H7 936 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 TLL2Q9Y6L7 1015 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 NFASCO94856 1347 aa6.66□□□□□ -1.34
HMGB3-202ENST00000419110 TMEM88BA6NKF7 163 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 SMTNL1A8MU46 457 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 PSMA7O14818 248 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 MAFGO15525 162 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 MED24O75448 989 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ARP10275 920 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ITGB5P18084 799 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 MAPK4P31152 587 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 MRPS9P82933 396 aaKnown RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 CYP4A11Q02928 519 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 CUL4BQ13620 913 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 MORC3Q14149 939 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 DHX8Q14562 1220 aaKnown RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 KCNB1Q14721 858 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 EPHA7Q15375 998 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 CT47A1Q5JQC4 288 aaPredicted RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ZNF746Q6NUN9 644 aaPredicted RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 SAPCD2Q86UD0 394 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 GPBP1Q86WP2 473 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 SMAP1Q8IYB5 467 aaPredicted RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ABRAQ8N0Z2 381 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 FAM43AQ8N2R8 423 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ANKRD13CQ8N6S4 541 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 FAM133AQ8N9E0 248 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 GIMAP8Q8ND71 665 aaPredicted RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 CYP2W1Q8TAV3 490 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ATP6V0A1Q93050 837 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 WNT2BQ93097 391 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 GJA10Q969M2 543 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 CCDC102AQ96A19 550 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 HHIPL1Q96JK4 782 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 PNMA5Q96PV4 448 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 UIMC1Q96RL1 719 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 EIF2AK1Q9BQI3 630 aaKnown RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 TRIM9Q9C026 710 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 BLZF1Q9H2G9 400 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 UNC45AQ9H3U1 944 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 JPH1Q9HDC5 661 aaPredicted RBP6.65□□□□□ -1.34
HMGB3-202ENST00000419110 TXNRD2Q9NNW7 524 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 BLOC1S4Q9NUP1 217 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 CTNND2Q9UQB3 1225 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 SAMM50Q9Y512 469 aa6.65□□□□□ -1.34
HMGB3-202ENST00000419110 ADGRA2Q96PE1 1338 aa6.65□□□□□ -1.35
HMGB3-202ENST00000419110 ARHGEF35A5YM69 484 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 ASB14A6NK59 587 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 GOLGA6L6A8MZA4 724 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 IKBKBO14920 756 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 EIF3JO75822 258 aaKnown RBP6.64□□□□□ -1.35
HMGB3-202ENST00000419110 TOMM70O94826 608 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 TPM3P06753 285 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 PLA2G4BP0C869 781 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 IDEP14735 1019 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 EDNRBP24530 442 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 PLCB2Q00722 1185 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 MDM2Q00987 491 aaPredicted RBP6.64□□□□□ -1.35
HMGB3-202ENST00000419110 FSTL1Q12841 308 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 PAK1Q13153 545 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 ITGB3BPQ13352 177 aaPredicted RBP6.64□□□□□ -1.35
HMGB3-202ENST00000419110 MCM6Q14566 821 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 TPD52L1Q16890 204 aaPredicted RBP6.64□□□□□ -1.35
HMGB3-202ENST00000419110 ZNF658Q5TYW1 1059 aaPredicted RBP6.64□□□□□ -1.35
HMGB3-202ENST00000419110 CST9Q5W186 159 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 KCNV1Q6PIU1 500 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 THSD4Q6ZMP0 1018 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 UNC13DQ70J99 1090 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 LUZP1Q86V48 1076 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 VSIG10LQ86VR7 867 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 CCDC65Q8IXS2 484 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 ANKRD20A12PQ8NF67 263 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 SPATA20Q8TB22 786 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 SOCS4Q8WXH5 440 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 STAMQ92783 540 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 DYDC2Q96IM9 177 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 C7orf25Q9BPX7 421 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 PORCNQ9H237 461 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 SLC5A4Q9NY91 659 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 KCND2Q9NZV8 630 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 RBPJLQ9UBG7 517 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 SLC9A2Q9UBY0 812 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 KIAA1024Q9UPX6 916 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 DNM3Q9UQ16 869 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 UBE4BO95155 1302 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 IGSF9BQ9UPX0 1349 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 RALGAPA2Q2PPJ7 1873 aa6.64□□□□□ -1.35
HMGB3-202ENST00000419110 DNAJC25-GNG10A0A024R161 153 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 A0A087WWV3 80 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 PVALEFA0A1B0GWK0 134 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 BICDL2A1A5D9 508 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 PPP1R3GB7ZBB8 358 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 EML1O00423 815 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 IGF2BP3O00425 579 aaKnown RBP eCLIP6.63□□□□□ -1.35
HMGB3-202ENST00000419110 ASTN1O14525 1302 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 PEX10O60683 326 aa6.63□□□□□ -1.35
HMGB3-202ENST00000419110 RHOBTB3O94955 611 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms