RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 B4GALNT4Q76KP1 1039 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 CNBD1Q8NA66 436 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 SYN2Q92777 582 aaPredicted RBP16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 HDAC9Q9UKV0 1011 aa16.63■□□□□ 0.25
SEMA3B-203ENST00000419007 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 SLURP2P0DP57 97 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 DDX47Q9H0S4 455 aaKnown RBP16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 E7EVH7 732 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 PPP4R3AQ6IN85 833 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 WHAMMQ8TF30 809 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 ATP6V1G3Q96LB4 118 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 CCNL1Q9UK58 526 aaPredicted RBP16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 CASP5P51878 434 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 MNAT1P51948 309 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 MMS22LQ6ZRQ5 1243 aa16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 ZNF571Q7Z3V5 609 aaPredicted RBP16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 ARMCX3Q9UH62 379 aaPredicted RBP16.62■□□□□ 0.25
SEMA3B-203ENST00000419007 SRCAPQ6ZRS2 3230 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 ERVK-9P63128 1117 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 ZNF772Q68DY9 489 aaPredicted RBP16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 KDM7AQ6ZMT4 941 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 TAF1DQ9H5J8 278 aaPredicted RBP16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 PPP1R37O75864 691 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 CYP11B2P19099 503 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 SEPT2Q15019 361 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 NAA35Q5VZE5 725 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 ALKBH5Q6P6C2 394 aaKnown RBP16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 UBLCP1Q8WVY7 318 aaPredicted RBP16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 GGA1Q9UJY5 639 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 KDM3AQ9Y4C1 1321 aa16.61■□□□□ 0.25
SEMA3B-203ENST00000419007 KIF4AO95239 1232 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 CTNNA1P35221 906 aaKnown RBP16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 GTF2IP78347 998 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 EPN3Q9H201 632 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 AIPL1Q9NZN9 384 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 A6NNZ2 444 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 TTLL1O95922 423 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 CPP00450 1065 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 UCHL3P15374 230 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 EXOC3L4Q17RC7 722 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 TUBB8Q3ZCM7 444 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 GANQ9H2C0 597 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 KCTD10Q9H3F6 313 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 MAST2Q6P0Q8 1798 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 GCOM1H8Y6P7 765 aaPredicted RBP16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 KRIT1O00522 736 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 MED24O75448 989 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 MYZAPP0CAP1 466 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 RXRBP28702 533 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 PEX26Q7Z412 305 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
SEMA3B-203ENST00000419007 MYO1FO00160 1098 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 SART1O43290 800 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 MDH1P40925 334 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 HDLBPQ00341 1268 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 CCT8L2Q96SF2 557 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 AMACRQ9UHK6 382 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 BACH1O14867 736 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 XRCC5P13010 732 aaKnown RBP16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 HSD17B3P37058 310 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 PSMC6P62333 389 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 CYP4A11Q02928 519 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 IFT88Q13099 833 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 PTGISQ16647 500 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 PRR16Q569H4 304 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 GJB7Q6PEY0 223 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 FBXO41Q8TF61 875 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
SEMA3B-203ENST00000419007 CLIC2O15247 247 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 PRPF4BQ13523 1007 aaKnown RBP16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 ARHGAP27Q6ZUM4 889 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 ADAT2Q7Z6V5 191 aaKnown RBP16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 DAAM2Q86T65 1068 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 NLRP14Q86W24 1093 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 SFR1Q86XK3 245 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 NAGPAQ9UK23 515 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 PCDHB13Q9Y5F0 798 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 PCDHA2Q9Y5H9 948 aa16.58■□□□□ 0.25
SEMA3B-203ENST00000419007 HMGB1P1B2RPK0 211 aaPredicted RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 ZBTB5O15062 677 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 MEFVO15553 781 aaPredicted RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 AFPP02771 609 aaKnown RBP16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 ITGA4P13612 1032 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 USP11P51784 963 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 SNAP25P60880 206 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 ARSHQ5FYA8 562 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 IRF2BP2Q7Z5L9 587 aa16.58■□□□□ 0.24
SEMA3B-203ENST00000419007 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms