RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 VASNQ6EMK4 673 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 CC2D1AQ6P1N0 951 aaPredicted RBP3.7□□□□□ -1.82
VPS41-206ENST00000418457 CNKSR3Q6P9H4 555 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 FAM129CQ86XR2 697 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 TMEFF1Q8IYR6 380 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 DLG3Q92796 817 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 USP7Q93009 1102 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 THG1LQ9NWX6 298 aaKnown RBP3.7□□□□□ -1.82
VPS41-206ENST00000418457 SMG5Q9UPR3 1016 aaKnown RBP3.7□□□□□ -1.82
VPS41-206ENST00000418457 KCTD3Q9Y597 815 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 PMF1-BGLAPU3KQ54 211 aa3.7□□□□□ -1.82
VPS41-206ENST00000418457 RB1CC1Q8TDY2 1594 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 DVL2O14641 736 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 FOXP2O15409 715 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 FKBP9O95302 570 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 ENO2P09104 434 aaPredicted RBP3.69□□□□□ -1.82
VPS41-206ENST00000418457 YBX3P16989 372 aaKnown RBP eCLIP3.69□□□□□ -1.82
VPS41-206ENST00000418457 SLC9A1P19634 815 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 SDHAP31040 664 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 LSSP48449 732 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 KPNA1P52294 538 aaPredicted RBP3.69□□□□□ -1.82
VPS41-206ENST00000418457 ITGA1P56199 1179 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 HERVK_113P62684 666 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 NFKB2Q00653 900 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 DBPQ10586 325 aaPredicted RBP3.69□□□□□ -1.82
VPS41-206ENST00000418457 STRN3Q13033 797 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 ZNF124Q15973 351 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 KCNA10Q16322 511 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 ZNF385BQ569K4 471 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 TMC5Q6UXY8 1006 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 FKBP9P1Q75LS8 142 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 PASD1Q8IV76 773 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 KIAA1958Q8N8K9 716 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 SMC1BQ8NDV3 1235 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 CHTF18Q8WVB6 975 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 GPR101Q96P66 508 aaPredicted RBP3.69□□□□□ -1.82
VPS41-206ENST00000418457 NOX5Q96PH1 765 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 TMEM209Q96SK2 561 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 TTC1Q99614 292 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 GORASP1Q9BQQ3 440 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 C11orf84Q9BUA3 381 aaPredicted RBP3.69□□□□□ -1.82
VPS41-206ENST00000418457 CD320Q9NPF0 282 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 ACSS2Q9NR19 701 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 DLL4Q9NR61 685 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 OXSMQ9NWU1 459 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 ARHGAP28Q9P2N2 729 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 RBPJLQ9UBG7 517 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 SPO11Q9Y5K1 396 aa3.69□□□□□ -1.82
VPS41-206ENST00000418457 ZNF839A8K0R7 811 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 NPIPB6E9PJ23 425 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 PLA2G1BP04054 148 aaKnown RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 CYP17A1P05093 508 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 C8AP07357 584 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 MMEP08473 750 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 BPIP17213 487 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 NCLP19338 710 aaKnown RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 AOAHP28039 575 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ADCYAP1R1P41586 468 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 FNTBP49356 437 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 LINC00310P59036 64 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 HTRA3P83110 453 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 PFKPQ01813 784 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ADAM9Q13443 819 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 SMAD4Q13485 552 aaKnown RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 CATSPEREQ5SY80 951 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 CREB3L3Q68CJ9 461 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 LIPIQ6XZB0 460 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 STRA8Q7Z7C7 330 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 STK32CQ86UX6 486 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 C11orf74Q86VG3 221 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 PROSER1Q86XN7 944 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 AFAP1L2Q8N4X5 818 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 EFHBQ8N7U6 833 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 TTLL6Q8N841 843 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 LINC00482Q8N8I6 264 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 KYQ8NBH2 561 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 HIPK4Q8NE63 616 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ZCRB1Q8TBF4 217 aaKnown RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 FNIP1Q8TF40 1166 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ASB15Q8WXK1 588 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ZBTB8AQ96BR9 441 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 SCYL1Q96KG9 808 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ZSWIM3Q96MP5 696 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 PWWP2AQ96N64 755 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 CLIC6Q96NY7 704 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 GBP4Q96PP9 640 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 WRNIP1Q96S55 665 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ELF4Q99607 663 aaPredicted RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 SYT3Q9BQG1 590 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 IFT22Q9H7X7 185 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 EPB41L4AQ9HCS5 686 aaPredicted RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 SLC39A2Q9NP94 309 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 H2AFY2Q9P0M6 372 aaPredicted RBP3.68□□□□□ -1.82
VPS41-206ENST00000418457 WASF3Q9UPY6 502 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 ASB1Q9Y576 335 aa3.68□□□□□ -1.82
VPS41-206ENST00000418457 PRAMEF22A3QJZ6 481 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 RASSF10A6NK89 507 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 NEMP1O14524 444 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 ZEB2O60315 1214 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 BRINP1O60477 761 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms