RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 LAMB1P07942 1786 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 PPP6R2O75170 966 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 INMTO95050 263 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 C7P10643 843 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 ARHGAP4P98171 946 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 ECM1Q16610 540 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 SNRNP48Q6IEG0 339 aaKnown RBP6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 KSR1Q8IVT5 923 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 PAGE5Q96GU1 130 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 MPP4Q96JB8 637 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 MTRQ99707 1265 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 MMRN2Q9H8L6 949 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 MAN1B1Q9UKM7 699 aa6.33□□□□□ -1.4
SPARCL1-202ENST00000418378 PHF20L1A8MW92 1017 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 MEIS2O14770 477 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 PGK2P07205 417 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 CYP2C8P10632 490 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 CD44P16070 742 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 EPHX2P34913 555 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TNNT3P45378 269 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 PSMC6P62333 389 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 KRT25Q7Z3Z0 450 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TMC6Q7Z403 805 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 NCAPG2Q86XI2 1143 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 GPC2Q8N158 579 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 NLRP7Q8WX94 980 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TBC1D31Q96DN5 1066 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 YIPF2Q9BWQ6 316 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 EHD4Q9H223 541 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 NMRK2Q9NPI5 230 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 EMILIN3Q9NT22 766 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TMOD4Q9NZQ9 345 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 USTQ9Y2C2 406 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TMX2Q9Y320 296 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 NFE2L3Q9Y4A8 694 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 CSADQ9Y600 493 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 QSER1Q2KHR3 1735 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TIAM2Q8IVF5 1701 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 MYH7BA7E2Y1 1941 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 GOLGA6L6A8MZA4 724 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 TNFRSF10BO14763 440 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 SLC26A4O43511 780 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 PPP1R12BO60237 982 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 PTPRAP18433 802 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 FSTL1Q12841 308 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 DPYDQ12882 1025 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 FKBP15Q5T1M5 1219 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 PDXDC1Q6P996 788 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 IPCEF1Q8WWN9 437 aaPredicted RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 XPO4Q9C0E2 1151 aaKnown RBP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 VPS16Q9H269 839 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 UNC80Q8N2C7 3258 aa6.32□□□□□ -1.4
SPARCL1-202ENST00000418378 A0A1W2PQ27 194 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 A0A1W2PQ64 194 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 A0A1W2PQD8 194 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 ESPNB1AK53 854 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 OPLAHO14841 1288 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 NKRFO15226 690 aaKnown RBP eCLIP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 ARP10275 920 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 AMPD3Q01432 767 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 CCDC173Q0VFZ6 552 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 BAATQ14032 418 aaPredicted RBP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 COL19A1Q14993 1142 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 DHX40Q8IX18 779 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 IQUBQ8NA54 791 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 PBXIP1Q96AQ6 731 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 TAAR1Q96RJ0 339 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 VRTNQ9H8Y1 702 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 UTP6Q9NYH9 597 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 COL20A1Q9P218 1284 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 USP20Q9Y2K6 914 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 TMEM88BA6NKF7 163 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 EDIL3O43854 480 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 TPPPO94811 219 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 SNHG28P0DPA3 235 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 SOX10P56693 466 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 RPS6P62753 249 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 CNTN2Q02246 1040 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 Q3C1V9 767 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 KRT79Q5XKE5 535 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 ANKRD13BQ86YJ7 626 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 ZNF280CQ8ND82 737 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 CHURC1Q8WUH1 139 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 ANKS1AQ92625 1134 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 TRERF1Q96PN7 1200 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 PPP1R16BQ96T49 567 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 SLF1Q9BQI6 1058 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 DISC1Q9NRI5 854 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 MAST2Q6P0Q8 1798 aa6.31□□□□□ -1.4
SPARCL1-202ENST00000418378 PABPN1LA6NDY0 278 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 GCOM1H8Y6P7 765 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms