RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GAKO14976 1311 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ABCB4P21439 1286 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 CTTNQ14247 550 aaKnown RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ZNF662Q6ZS27 426 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 TRIM59Q8IWR1 403 aa13.06□□□□□ -0.32
LIMK1-202ENST00000418310 ARMCX3Q9UH62 379 aaPredicted RBP13.06□□□□□ -0.32
LIMK1-202ENST00000418310 GRID2IPA4D2P6 1211 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 RAD51CO43502 376 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 ARHGAP4P98171 946 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 PPP4R3AQ6IN85 833 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
LIMK1-202ENST00000418310 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 LRRC27Q9C0I9 530 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 DHX36Q9H2U1 1008 aaKnown RBP13.05□□□□□ -0.32
LIMK1-202ENST00000418310 BACH1O14867 736 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 POLD1P28340 1107 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 GUCY1A3Q02108 690 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 VPS72Q15906 364 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 SLC18A3Q16572 532 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 CASKIN2Q8WXE0 1202 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 NT5C3AQ9H0P0 336 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 DDX47Q9H0S4 455 aaKnown RBP13.05□□□□□ -0.32
LIMK1-202ENST00000418310 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
LIMK1-202ENST00000418310 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
LIMK1-202ENST00000418310 AKAP3O75969 853 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 GFPT2O94808 682 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 COPB2P35606 906 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 PSMD2Q13200 908 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 NNTQ13423 1086 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 LLGL1Q15334 1064 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 ZC2HC1CQ53FD0 456 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 MEX3CQ5U5Q3 659 aaKnown RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 ZNF622Q969S3 477 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 WNK3Q9BYP7 1800 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 FAM86B1E9PN63 330 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 FAM86B2P0C5J1 330 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 EXOC3L4Q17RC7 722 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 U2AF1L4Q8WU68 220 aaKnown RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 SH2D3AQ9BRG2 576 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 KCTD10Q9H3F6 313 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 SPDYE3A6NKU9 549 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 SNHG28P0DPA3 235 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 NMT1P30419 496 aaKnown RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 RPS6KA1Q15418 735 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 CERKLQ49MI3 558 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 TPH2Q8IWU9 490 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 IFT20Q8IY31 132 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 LUC7LQ9NQ29 371 aaKnown RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-202ENST00000418310 DNM3Q9UQ16 869 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 KDM3AQ9Y4C1 1321 aa13.04□□□□□ -0.32
LIMK1-202ENST00000418310 DDX39AO00148 427 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 CFBP00751 764 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 XRCC5P13010 732 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 UCHL3P15374 230 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 CLK2P49760 499 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 ICA1Q05084 483 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 COG2Q14746 738 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 NAB2Q15742 525 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 GPATCH4Q5T3I0 446 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 ALKBH5Q6P6C2 394 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 PROM2Q8N271 834 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 RREB1Q92766 1687 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 BBOX1O75936 387 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 CYP2J2P51589 502 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 RBM46Q8TBY0 533 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 NDUFAB1O14561 156 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 TBCAO75347 108 aaKnown RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 LCA5LO95447 670 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 ITGA4P13612 1032 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 SEC24CP53992 1094 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
LIMK1-202ENST00000418310 GIT2Q14161 759 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 ARHGAP44Q17R89 818 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 PCDHA2Q9Y5H9 948 aa13.03□□□□□ -0.32
LIMK1-202ENST00000418310 hCG_1984214I3L0E3 225 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 MEIS2O14770 477 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 PJA2O43164 708 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 OPA1O60313 960 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 TRIM37O94972 964 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 TRIM49P0CI25 452 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 TRIM49CP0CI26 452 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 CRKP46108 304 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 SLC12A3P55017 1021 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 PPFIA1Q13136 1202 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 CRY2Q49AN0 593 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.32
LIMK1-202ENST00000418310 APOBEC3HQ6NTF7 200 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms