RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ADCY1Q08828 1119 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 STXBP2Q15833 593 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF658Q5TYW1 1059 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 APOA5Q6Q788 366 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 RMDN3Q96TC7 470 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TLR7Q9NYK1 1049 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TMEM247A6NEH6 219 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 hCG_1984214I3L0E3 225 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 HIP1RO75146 1068 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 NSUN2Q08J23 767 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 HABP4Q5JVS0 413 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 MFSD14CQ5VZR4 134 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TRIM67Q6ZTA4 783 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 BZW1Q7L1Q6 419 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF713Q8N859 430 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 EFCAB8A8MWE9 144 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 PSMA2P25787 234 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 MXI1P50539 228 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 CACNB3P54284 484 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 DRP2Q13474 957 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ACCSLQ4AC99 568 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TEX2Q8IWB9 1127 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 FBXO18Q8NFZ0 1043 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 SNX19Q92543 992 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 HAUS4Q9H6D7 363 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TBK1Q9UHD2 729 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ABCC4O15439 1325 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 PPP6R2O75170 966 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 GNL1P36915 607 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 MMP19Q99542 508 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 RNF181Q9P0P0 153 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 CLDN3O15551 220 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 GSPT1P15170 499 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 CRKP46108 304 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ART3Q13508 389 aa12.08□□□□□ -0.48
PTCH1-205ENST00000418258 APOBEC3FQ8IUX4 373 aaKnown RBP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-205ENST00000418258 ESRRBO95718 433 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 CXCR5P32302 372 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 MAN2A1Q16706 1144 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 FAM83BQ5T0W9 1011 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 TRIM42Q8IWZ5 723 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 ANKARQ7Z5J8 1434 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 TTI1O43156 1089 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 ZBED1O96006 694 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 PLCG1P19174 1290 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 CASP14P31944 242 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 FBXL13Q8NEE6 735 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 CAPS2Q9BXY5 557 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 DAAM1Q9Y4D1 1078 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 PALLDQ8WX93 1383 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 ERVV-1B6SEH8 477 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 CHEK2O96017 543 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 CLTAP09496 248 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 TTC19Q6DKK2 380 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 CCHCR1Q8TD31 782 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 SFI1A8K8P3 1242 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 KIAA1755Q5JYT7 1200 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 RAET1EQ8TD07 263 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 COPRSQ9NQ92 184 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 JRKLQ9Y4A0 524 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 IFNAR2P48551 515 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 GSDMAQ96QA5 445 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 SFMBT1Q9UHJ3 866 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 ENC1O14682 589 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 ECEL1O95672 775 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 SH3RF3Q8TEJ3 882 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 XAB2Q9HCS7 855 aaKnown RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 TOPORSQ9NS56 1045 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 EMILIN3Q9NT22 766 aa12.07□□□□□ -0.48
PTCH1-205ENST00000418258 INTS9Q9NV88 658 aaKnown RBP12.07□□□□□ -0.48
PTCH1-205ENST00000418258 APOEP02649 317 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 JAK3P52333 1124 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 PSMD2Q13200 908 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 C10orf76Q5T2E6 689 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 FOXP4Q8IVH2 680 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 NGRNQ9NPE2 291 aaKnown RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 CEP170Q5SW79 1584 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 LRRD1A4D1F6 860 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 BSDC1Q9NW68 430 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 PZPP20742 1482 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 HUS1O60921 280 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 NCF2P19878 526 aaPredicted RBP12.06□□□□□ -0.48
PTCH1-205ENST00000418258 PHKA2P46019 1235 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ALCAMQ13740 583 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 MAPK6Q16659 721 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 KIF19Q2TAC6 998 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ZSWIM5Q9P217 1185 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 ECE2O60344 883 aa12.06□□□□□ -0.48
PTCH1-205ENST00000418258 SUN1O94901 812 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms